Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six2Q62232 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.51■□□□□ 0.71
Six2Q62232 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.51■□□□□ 0.71
Six2Q62232 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.51■□□□□ 0.71
Six2Q62232 Gm6365-201ENSMUST00000054711 744 ntBASIC19.51■□□□□ 0.71
Six2Q62232 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six2Q62232 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six2Q62232 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six2Q62232 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Six2Q62232 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six2Q62232 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six2Q62232 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Six2Q62232 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six2Q62232 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Six2Q62232 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Six2Q62232 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six2Q62232 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six2Q62232 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six2Q62232 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Six2Q62232 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Six2Q62232 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.5■□□□□ 0.71
Six2Q62232 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.5■□□□□ 0.71
Six2Q62232 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six2Q62232 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six2Q62232 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six2Q62232 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Six2Q62232 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.49■□□□□ 0.71
Six2Q62232 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six2Q62232 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Six2Q62232 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Six2Q62232 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.49■□□□□ 0.71
Six2Q62232 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six2Q62232 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Six2Q62232 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six2Q62232 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Six2Q62232 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Six2Q62232 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six2Q62232 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six2Q62232 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six2Q62232 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six2Q62232 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.48■□□□□ 0.71
Six2Q62232 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six2Q62232 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six2Q62232 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six2Q62232 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six2Q62232 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.48■□□□□ 0.71
Six2Q62232 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six2Q62232 Gm7291-201ENSMUST00000199147 382 ntBASIC19.48■□□□□ 0.71
Six2Q62232 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.48■□□□□ 0.71
Six2Q62232 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Six2Q62232 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Six2Q62232 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Six2Q62232 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.47■□□□□ 0.71
Six2Q62232 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Six2Q62232 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Six2Q62232 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Six2Q62232 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.47■□□□□ 0.71
Six2Q62232 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Six2Q62232 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Six2Q62232 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six2Q62232 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six2Q62232 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six2Q62232 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six2Q62232 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six2Q62232 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six2Q62232 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six2Q62232 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Six2Q62232 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Six2Q62232 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six2Q62232 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.46■□□□□ 0.71
Six2Q62232 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Six2Q62232 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six2Q62232 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
Six2Q62232 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six2Q62232 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Six2Q62232 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six2Q62232 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Six2Q62232 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six2Q62232 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.45■□□□□ 0.7
Six2Q62232 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six2Q62232 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Six2Q62232 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.45■□□□□ 0.7
Six2Q62232 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six2Q62232 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six2Q62232 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six2Q62232 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six2Q62232 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six2Q62232 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six2Q62232 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six2Q62232 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six2Q62232 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six2Q62232 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six2Q62232 Gm6211-202ENSMUST00000167849 925 ntBASIC19.44■□□□□ 0.7
Six2Q62232 Gm27405-201ENSMUST00000184201 112 ntBASIC19.44■□□□□ 0.7
Six2Q62232 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
Six2Q62232 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.44■□□□□ 0.7
Six2Q62232 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Six2Q62232 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Six2Q62232 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six2Q62232 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms