Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Notch3Q61982 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Notch3Q61982 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Notch3Q61982 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Notch3Q61982 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Notch3Q61982 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Notch3Q61982 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Notch3Q61982 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Notch3Q61982 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Notch3Q61982 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Notch3Q61982 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Notch3Q61982 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Notch3Q61982 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Notch3Q61982 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Notch3Q61982 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC13.95□□□□□ -0.18
Notch3Q61982 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Notch3Q61982 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Notch3Q61982 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Notch3Q61982 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.95□□□□□ -0.18
Notch3Q61982 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Notch3Q61982 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.95□□□□□ -0.18
Notch3Q61982 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Notch3Q61982 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Notch3Q61982 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.95□□□□□ -0.18
Notch3Q61982 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Notch3Q61982 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Notch3Q61982 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.95□□□□□ -0.18
Notch3Q61982 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Notch3Q61982 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Notch3Q61982 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Notch3Q61982 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Notch3Q61982 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Notch3Q61982 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Notch3Q61982 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.95□□□□□ -0.18
Notch3Q61982 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Notch3Q61982 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Notch3Q61982 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Notch3Q61982 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Notch3Q61982 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Notch3Q61982 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Notch3Q61982 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Notch3Q61982 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.94□□□□□ -0.18
Notch3Q61982 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.94□□□□□ -0.18
Notch3Q61982 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.94□□□□□ -0.18
Notch3Q61982 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Notch3Q61982 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Notch3Q61982 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Notch3Q61982 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Notch3Q61982 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Notch3Q61982 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Notch3Q61982 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Notch3Q61982 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Notch3Q61982 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch3Q61982 Gm15378-201ENSMUST00000121894 207 ntBASIC13.93□□□□□ -0.18
Notch3Q61982 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.93□□□□□ -0.18
Notch3Q61982 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.93□□□□□ -0.18
Notch3Q61982 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Notch3Q61982 Gm9987-201ENSMUST00000069768 567 ntBASIC13.93□□□□□ -0.18
Notch3Q61982 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Notch3Q61982 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Notch3Q61982 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch3Q61982 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch3Q61982 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch3Q61982 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch3Q61982 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Notch3Q61982 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch3Q61982 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch3Q61982 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch3Q61982 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Notch3Q61982 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch3Q61982 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch3Q61982 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch3Q61982 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.93□□□□□ -0.18
Notch3Q61982 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch3Q61982 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch3Q61982 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 Mir1199-201ENSMUST00000117015 119 ntBASIC13.92□□□□□ -0.18
Notch3Q61982 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Notch3Q61982 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Notch3Q61982 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.92□□□□□ -0.18
Notch3Q61982 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Notch3Q61982 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch3Q61982 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Notch3Q61982 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms