Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.45■□□□□ 0.54
Six4Q61321 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Six4Q61321 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.45■□□□□ 0.54
Six4Q61321 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six4Q61321 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six4Q61321 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Six4Q61321 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six4Q61321 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.45■□□□□ 0.54
Six4Q61321 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six4Q61321 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.44■□□□□ 0.54
Six4Q61321 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Six4Q61321 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six4Q61321 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six4Q61321 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six4Q61321 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Six4Q61321 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six4Q61321 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.44■□□□□ 0.54
Six4Q61321 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six4Q61321 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six4Q61321 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six4Q61321 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six4Q61321 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six4Q61321 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Six4Q61321 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.43■□□□□ 0.54
Six4Q61321 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six4Q61321 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.43■□□□□ 0.54
Six4Q61321 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six4Q61321 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six4Q61321 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six4Q61321 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.43■□□□□ 0.54
Six4Q61321 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Six4Q61321 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six4Q61321 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Six4Q61321 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six4Q61321 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six4Q61321 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Six4Q61321 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six4Q61321 Fst-202ENSMUST00000223640 2612 ntBASIC18.42■□□□□ 0.54
Six4Q61321 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six4Q61321 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six4Q61321 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six4Q61321 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Six4Q61321 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six4Q61321 Gm12441-201ENSMUST00000121806 588 ntBASIC18.42■□□□□ 0.54
Six4Q61321 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six4Q61321 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Six4Q61321 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Six4Q61321 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.42■□□□□ 0.54
Six4Q61321 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six4Q61321 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.41■□□□□ 0.54
Six4Q61321 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.41■□□□□ 0.54
Six4Q61321 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six4Q61321 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six4Q61321 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six4Q61321 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six4Q61321 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Six4Q61321 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Six4Q61321 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.41■□□□□ 0.54
Six4Q61321 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.41■□□□□ 0.54
Six4Q61321 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.41■□□□□ 0.54
Six4Q61321 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.41■□□□□ 0.54
Six4Q61321 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.41■□□□□ 0.54
Six4Q61321 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Six4Q61321 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six4Q61321 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Six4Q61321 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Six4Q61321 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 Gm2399-201ENSMUST00000104944 225 ntBASIC18.4■□□□□ 0.54
Six4Q61321 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Six4Q61321 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Six4Q61321 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.4■□□□□ 0.54
Six4Q61321 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Six4Q61321 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.4■□□□□ 0.54
Six4Q61321 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six4Q61321 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Six4Q61321 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Six4Q61321 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Six4Q61321 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Six4Q61321 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.39■□□□□ 0.53
Six4Q61321 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.39■□□□□ 0.53
Six4Q61321 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.39■□□□□ 0.53
Six4Q61321 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Six4Q61321 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six4Q61321 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms