Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav2Q5R1I9 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.55□□□□□ -0.08
Trav2Q5R1I9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav2Q5R1I9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav2Q5R1I9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav2Q5R1I9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trav2Q5R1I9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav2Q5R1I9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav2Q5R1I9 Flg-201ENSMUST00000050758 1488 ntBASIC14.55□□□□□ -0.08
Trav2Q5R1I9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav2Q5R1I9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav2Q5R1I9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav2Q5R1I9 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Gm18666-201ENSMUST00000190039 958 ntBASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Trav2Q5R1I9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav2Q5R1I9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav2Q5R1I9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav2Q5R1I9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav2Q5R1I9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav2Q5R1I9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav2Q5R1I9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav2Q5R1I9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav2Q5R1I9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav2Q5R1I9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav2Q5R1I9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav2Q5R1I9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav2Q5R1I9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav2Q5R1I9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav2Q5R1I9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Trav2Q5R1I9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav2Q5R1I9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav2Q5R1I9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav2Q5R1I9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav2Q5R1I9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav2Q5R1I9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav2Q5R1I9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav2Q5R1I9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav2Q5R1I9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav2Q5R1I9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav2Q5R1I9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav2Q5R1I9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.52□□□□□ -0.08
Trav2Q5R1I9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav2Q5R1I9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav2Q5R1I9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav2Q5R1I9 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.52□□□□□ -0.09
Trav2Q5R1I9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav2Q5R1I9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav2Q5R1I9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav2Q5R1I9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav2Q5R1I9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav2Q5R1I9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav2Q5R1I9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav2Q5R1I9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav2Q5R1I9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Gm11249-201ENSMUST00000117071 859 ntBASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms