Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-2Q5R1A4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-2Q5R1A4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-2Q5R1A4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-2Q5R1A4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-2Q5R1A4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trdv2-2Q5R1A4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-2Q5R1A4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-2Q5R1A4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Spcs1-204ENSMUST00000226782 949 ntBASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-2Q5R1A4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdv2-2Q5R1A4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trdv2-2Q5R1A4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.97□□□□□ -0.17
Trdv2-2Q5R1A4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trdv2-2Q5R1A4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.97□□□□□ -0.17
Trdv2-2Q5R1A4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trdv2-2Q5R1A4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trdv2-2Q5R1A4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trdv2-2Q5R1A4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trdv2-2Q5R1A4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Trdv2-2Q5R1A4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trdv2-2Q5R1A4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trdv2-2Q5R1A4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trdv2-2Q5R1A4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trdv2-2Q5R1A4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trdv2-2Q5R1A4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trdv2-2Q5R1A4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trdv2-2Q5R1A4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trdv2-2Q5R1A4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trdv2-2Q5R1A4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.96□□□□□ -0.18
Trdv2-2Q5R1A4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trdv2-2Q5R1A4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trdv2-2Q5R1A4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trdv2-2Q5R1A4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trdv2-2Q5R1A4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trdv2-2Q5R1A4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trdv2-2Q5R1A4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdv2-2Q5R1A4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trdv2-2Q5R1A4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdv2-2Q5R1A4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
Trdv2-2Q5R1A4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.95□□□□□ -0.18
Trdv2-2Q5R1A4 Gm43137-201ENSMUST00000198052 594 ntBASIC13.95□□□□□ -0.18
Trdv2-2Q5R1A4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trdv2-2Q5R1A4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdv2-2Q5R1A4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdv2-2Q5R1A4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdv2-2Q5R1A4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdv2-2Q5R1A4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms