Protein–RNA interactions for Protein: Q5BKP2

Usp13, Ubiquitin carboxyl-terminal hydrolase 13, mousemouse

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp13Q5BKP2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp13Q5BKP2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.56■□□□□ 0.88
Usp13Q5BKP2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.56■□□□□ 0.88
Usp13Q5BKP2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp13Q5BKP2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp13Q5BKP2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Usp13Q5BKP2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Usp13Q5BKP2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Usp13Q5BKP2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp13Q5BKP2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp13Q5BKP2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Usp13Q5BKP2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp13Q5BKP2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp13Q5BKP2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Usp13Q5BKP2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp13Q5BKP2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp13Q5BKP2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.55■□□□□ 0.88
Usp13Q5BKP2 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.55■□□□□ 0.88
Usp13Q5BKP2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp13Q5BKP2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp13Q5BKP2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp13Q5BKP2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
Usp13Q5BKP2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp13Q5BKP2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp13Q5BKP2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp13Q5BKP2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp13Q5BKP2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.54■□□□□ 0.88
Usp13Q5BKP2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp13Q5BKP2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.54■□□□□ 0.88
Usp13Q5BKP2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.54■□□□□ 0.88
Usp13Q5BKP2 Gm5408-201ENSMUST00000197998 747 ntBASIC20.54■□□□□ 0.88
Usp13Q5BKP2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.54■□□□□ 0.88
Usp13Q5BKP2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.54■□□□□ 0.88
Usp13Q5BKP2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp13Q5BKP2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp13Q5BKP2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp13Q5BKP2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Usp13Q5BKP2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Fst-202ENSMUST00000223640 2612 ntBASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp13Q5BKP2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp13Q5BKP2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp13Q5BKP2 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.52■□□□□ 0.88
Usp13Q5BKP2 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.52■□□□□ 0.88
Usp13Q5BKP2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp13Q5BKP2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp13Q5BKP2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Usp13Q5BKP2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.52■□□□□ 0.88
Usp13Q5BKP2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp13Q5BKP2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp13Q5BKP2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Usp13Q5BKP2 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.52■□□□□ 0.87
Usp13Q5BKP2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp13Q5BKP2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp13Q5BKP2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp13Q5BKP2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp13Q5BKP2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp13Q5BKP2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp13Q5BKP2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Usp13Q5BKP2 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.51■□□□□ 0.87
Usp13Q5BKP2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp13Q5BKP2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp13Q5BKP2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp13Q5BKP2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Usp13Q5BKP2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Usp13Q5BKP2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp13Q5BKP2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Usp13Q5BKP2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Usp13Q5BKP2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.51■□□□□ 0.87
Usp13Q5BKP2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp13Q5BKP2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp13Q5BKP2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp13Q5BKP2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Usp13Q5BKP2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp13Q5BKP2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.5■□□□□ 0.87
Usp13Q5BKP2 Gm6420-201ENSMUST00000193885 723 ntBASIC20.5■□□□□ 0.87
Usp13Q5BKP2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp13Q5BKP2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Usp13Q5BKP2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Usp13Q5BKP2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp13Q5BKP2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp13Q5BKP2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp13Q5BKP2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms