Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rc3h1Q4VGL6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rc3h1Q4VGL6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rc3h1Q4VGL6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rc3h1Q4VGL6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rc3h1Q4VGL6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rc3h1Q4VGL6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rc3h1Q4VGL6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rc3h1Q4VGL6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Rc3h1Q4VGL6 Golph3-205ENSMUST00000228671 2842 ntBASIC21.14■□□□□ 0.97
Rc3h1Q4VGL6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.14■□□□□ 0.97
Rc3h1Q4VGL6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.14■□□□□ 0.97
Rc3h1Q4VGL6 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.14■□□□□ 0.97
Rc3h1Q4VGL6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.14■□□□□ 0.97
Rc3h1Q4VGL6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rc3h1Q4VGL6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rc3h1Q4VGL6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rc3h1Q4VGL6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Rc3h1Q4VGL6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rc3h1Q4VGL6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rc3h1Q4VGL6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rc3h1Q4VGL6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rc3h1Q4VGL6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rc3h1Q4VGL6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rc3h1Q4VGL6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rc3h1Q4VGL6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rc3h1Q4VGL6 Gm38285-201ENSMUST00000192928 922 ntBASIC21.13■□□□□ 0.97
Rc3h1Q4VGL6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rc3h1Q4VGL6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rc3h1Q4VGL6 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.13■□□□□ 0.97
Rc3h1Q4VGL6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rc3h1Q4VGL6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rc3h1Q4VGL6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rc3h1Q4VGL6 Gm15378-201ENSMUST00000121894 207 ntBASIC21.12■□□□□ 0.97
Rc3h1Q4VGL6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rc3h1Q4VGL6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rc3h1Q4VGL6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.12■□□□□ 0.97
Rc3h1Q4VGL6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rc3h1Q4VGL6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rc3h1Q4VGL6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rc3h1Q4VGL6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.11■□□□□ 0.97
Rc3h1Q4VGL6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rc3h1Q4VGL6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rc3h1Q4VGL6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rc3h1Q4VGL6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rc3h1Q4VGL6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.11■□□□□ 0.97
Rc3h1Q4VGL6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Rc3h1Q4VGL6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rc3h1Q4VGL6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Rc3h1Q4VGL6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rc3h1Q4VGL6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Rc3h1Q4VGL6 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.11■□□□□ 0.97
Rc3h1Q4VGL6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rc3h1Q4VGL6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rc3h1Q4VGL6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rc3h1Q4VGL6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rc3h1Q4VGL6 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.1■□□□□ 0.97
Rc3h1Q4VGL6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rc3h1Q4VGL6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rc3h1Q4VGL6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rc3h1Q4VGL6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rc3h1Q4VGL6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rc3h1Q4VGL6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rc3h1Q4VGL6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rc3h1Q4VGL6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rc3h1Q4VGL6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rc3h1Q4VGL6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rc3h1Q4VGL6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.09■□□□□ 0.97
Rc3h1Q4VGL6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rc3h1Q4VGL6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.09■□□□□ 0.97
Rc3h1Q4VGL6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rc3h1Q4VGL6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rc3h1Q4VGL6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rc3h1Q4VGL6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rc3h1Q4VGL6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rc3h1Q4VGL6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Rc3h1Q4VGL6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rc3h1Q4VGL6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rc3h1Q4VGL6 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.08■□□□□ 0.97
Rc3h1Q4VGL6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rc3h1Q4VGL6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Rc3h1Q4VGL6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rc3h1Q4VGL6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Rc3h1Q4VGL6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Rc3h1Q4VGL6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rc3h1Q4VGL6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Rc3h1Q4VGL6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.08■□□□□ 0.97
Rc3h1Q4VGL6 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.08■□□□□ 0.97
Rc3h1Q4VGL6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Rc3h1Q4VGL6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Rc3h1Q4VGL6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rc3h1Q4VGL6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rc3h1Q4VGL6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Rc3h1Q4VGL6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Rc3h1Q4VGL6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rc3h1Q4VGL6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.07■□□□□ 0.96
Rc3h1Q4VGL6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rc3h1Q4VGL6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rc3h1Q4VGL6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.06■□□□□ 0.96
Rc3h1Q4VGL6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms