Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Fam196aQ3USH1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.38■□□□□ 0.53
Fam196aQ3USH1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam196aQ3USH1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam196aQ3USH1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam196aQ3USH1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Fam196aQ3USH1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam196aQ3USH1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Fam196aQ3USH1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam196aQ3USH1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam196aQ3USH1 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.37■□□□□ 0.53
Fam196aQ3USH1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.37■□□□□ 0.53
Fam196aQ3USH1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.37■□□□□ 0.53
Fam196aQ3USH1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam196aQ3USH1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam196aQ3USH1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam196aQ3USH1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam196aQ3USH1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Fam196aQ3USH1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam196aQ3USH1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam196aQ3USH1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Fam196aQ3USH1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fam196aQ3USH1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Fam196aQ3USH1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Fam196aQ3USH1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.36■□□□□ 0.53
Fam196aQ3USH1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fam196aQ3USH1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.36■□□□□ 0.53
Fam196aQ3USH1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fam196aQ3USH1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fam196aQ3USH1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fam196aQ3USH1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Fam196aQ3USH1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fam196aQ3USH1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.35■□□□□ 0.53
Fam196aQ3USH1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fam196aQ3USH1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fam196aQ3USH1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Fam196aQ3USH1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.35■□□□□ 0.53
Fam196aQ3USH1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Fam196aQ3USH1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.35■□□□□ 0.53
Fam196aQ3USH1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.35■□□□□ 0.53
Fam196aQ3USH1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Fam196aQ3USH1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.35■□□□□ 0.53
Fam196aQ3USH1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.35■□□□□ 0.53
Fam196aQ3USH1 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.35■□□□□ 0.53
Fam196aQ3USH1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fam196aQ3USH1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fam196aQ3USH1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Fam196aQ3USH1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fam196aQ3USH1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.34■□□□□ 0.53
Fam196aQ3USH1 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.34■□□□□ 0.53
Fam196aQ3USH1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fam196aQ3USH1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Fam196aQ3USH1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.34■□□□□ 0.53
Fam196aQ3USH1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fam196aQ3USH1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fam196aQ3USH1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Fam196aQ3USH1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Fam196aQ3USH1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fam196aQ3USH1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Fam196aQ3USH1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Fam196aQ3USH1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fam196aQ3USH1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.34■□□□□ 0.53
Fam196aQ3USH1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fam196aQ3USH1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Fam196aQ3USH1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Fam196aQ3USH1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Fam196aQ3USH1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Fam196aQ3USH1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Fam196aQ3USH1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Fam196aQ3USH1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.33■□□□□ 0.52
Fam196aQ3USH1 Gm18669-201ENSMUST00000216049 778 ntBASIC18.33■□□□□ 0.52
Fam196aQ3USH1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fam196aQ3USH1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.33■□□□□ 0.52
Fam196aQ3USH1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fam196aQ3USH1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fam196aQ3USH1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fam196aQ3USH1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fam196aQ3USH1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Fam196aQ3USH1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fam196aQ3USH1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fam196aQ3USH1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Fam196aQ3USH1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Fam196aQ3USH1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam196aQ3USH1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam196aQ3USH1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam196aQ3USH1 Gm38027-201ENSMUST00000192315 235 ntBASIC18.32■□□□□ 0.52
Fam196aQ3USH1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam196aQ3USH1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam196aQ3USH1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Fam196aQ3USH1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Fam196aQ3USH1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Fam196aQ3USH1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.32■□□□□ 0.52
Fam196aQ3USH1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam196aQ3USH1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam196aQ3USH1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Fam196aQ3USH1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam196aQ3USH1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam196aQ3USH1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Fam196aQ3USH1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam196aQ3USH1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms