Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cks1brtQ3UNC9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1brtQ3UNC9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1brtQ3UNC9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1brtQ3UNC9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1brtQ3UNC9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1brtQ3UNC9 Gm10620-201ENSMUST00000098379 1332 ntBASIC13.21□□□□□ -0.29
Cks1brtQ3UNC9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1brtQ3UNC9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1brtQ3UNC9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1brtQ3UNC9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1brtQ3UNC9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1brtQ3UNC9 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.21□□□□□ -0.29
Cks1brtQ3UNC9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cks1brtQ3UNC9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cks1brtQ3UNC9 AA386476-201ENSMUST00000098781 1665 ntBASIC13.21□□□□□ -0.3
Cks1brtQ3UNC9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cks1brtQ3UNC9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cks1brtQ3UNC9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cks1brtQ3UNC9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.2□□□□□ -0.3
Cks1brtQ3UNC9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1brtQ3UNC9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1brtQ3UNC9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1brtQ3UNC9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1brtQ3UNC9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.2□□□□□ -0.3
Cks1brtQ3UNC9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1brtQ3UNC9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1brtQ3UNC9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1brtQ3UNC9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1brtQ3UNC9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1brtQ3UNC9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC13.2□□□□□ -0.3
Cks1brtQ3UNC9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms