Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Naf1Q3UMQ8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Naf1Q3UMQ8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.54■□□□□ 0.56
Naf1Q3UMQ8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.54■□□□□ 0.56
Naf1Q3UMQ8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Naf1Q3UMQ8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Naf1Q3UMQ8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Naf1Q3UMQ8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Naf1Q3UMQ8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Naf1Q3UMQ8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Naf1Q3UMQ8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Naf1Q3UMQ8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Naf1Q3UMQ8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Gm18666-201ENSMUST00000190039 958 ntBASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Naf1Q3UMQ8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Naf1Q3UMQ8 Flg-201ENSMUST00000050758 1488 ntBASIC18.52■□□□□ 0.56
Naf1Q3UMQ8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Naf1Q3UMQ8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Naf1Q3UMQ8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Naf1Q3UMQ8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.52■□□□□ 0.56
Naf1Q3UMQ8 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.52■□□□□ 0.56
Naf1Q3UMQ8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.52■□□□□ 0.56
Naf1Q3UMQ8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.52■□□□□ 0.56
Naf1Q3UMQ8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Naf1Q3UMQ8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Naf1Q3UMQ8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Naf1Q3UMQ8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Naf1Q3UMQ8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Naf1Q3UMQ8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Naf1Q3UMQ8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Naf1Q3UMQ8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.55
Naf1Q3UMQ8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Naf1Q3UMQ8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Naf1Q3UMQ8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Naf1Q3UMQ8 Gm13158-201ENSMUST00000122007 736 ntBASIC18.51■□□□□ 0.55
Naf1Q3UMQ8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Naf1Q3UMQ8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Naf1Q3UMQ8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Naf1Q3UMQ8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Naf1Q3UMQ8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Naf1Q3UMQ8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Naf1Q3UMQ8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Naf1Q3UMQ8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Naf1Q3UMQ8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Naf1Q3UMQ8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Naf1Q3UMQ8 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.5■□□□□ 0.55
Naf1Q3UMQ8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.5■□□□□ 0.55
Naf1Q3UMQ8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.5■□□□□ 0.55
Naf1Q3UMQ8 Mtag2-201ENSMUST00000058665 714 ntBASIC18.5■□□□□ 0.55
Naf1Q3UMQ8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Naf1Q3UMQ8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Naf1Q3UMQ8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Naf1Q3UMQ8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Naf1Q3UMQ8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Naf1Q3UMQ8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Naf1Q3UMQ8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Naf1Q3UMQ8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.49■□□□□ 0.55
Naf1Q3UMQ8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.49■□□□□ 0.55
Naf1Q3UMQ8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Naf1Q3UMQ8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.49■□□□□ 0.55
Naf1Q3UMQ8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Naf1Q3UMQ8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.49■□□□□ 0.55
Naf1Q3UMQ8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Naf1Q3UMQ8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Naf1Q3UMQ8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.49■□□□□ 0.55
Naf1Q3UMQ8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Naf1Q3UMQ8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.49■□□□□ 0.55
Naf1Q3UMQ8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Naf1Q3UMQ8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Naf1Q3UMQ8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Naf1Q3UMQ8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Naf1Q3UMQ8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.48■□□□□ 0.55
Naf1Q3UMQ8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.48■□□□□ 0.55
Naf1Q3UMQ8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.48■□□□□ 0.55
Naf1Q3UMQ8 Zfp783-201ENSMUST00000095946 670 ntBASIC18.48■□□□□ 0.55
Naf1Q3UMQ8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Naf1Q3UMQ8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Naf1Q3UMQ8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Naf1Q3UMQ8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Naf1Q3UMQ8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Naf1Q3UMQ8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Naf1Q3UMQ8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms