Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Rab3c-203ENSMUST00000224180 967 ntBASIC17.67■□□□□ 0.42
Rnf44Q3UHJ8 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.67■□□□□ 0.42
Rnf44Q3UHJ8 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.67■□□□□ 0.42
Rnf44Q3UHJ8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf44Q3UHJ8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf44Q3UHJ8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Rnf44Q3UHJ8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf44Q3UHJ8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf44Q3UHJ8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf44Q3UHJ8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf44Q3UHJ8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf44Q3UHJ8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf44Q3UHJ8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf44Q3UHJ8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rnf44Q3UHJ8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf44Q3UHJ8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf44Q3UHJ8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf44Q3UHJ8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf44Q3UHJ8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf44Q3UHJ8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf44Q3UHJ8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.65■□□□□ 0.42
Rnf44Q3UHJ8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf44Q3UHJ8 Gm4968-201ENSMUST00000071458 858 ntBASIC17.65■□□□□ 0.42
Rnf44Q3UHJ8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf44Q3UHJ8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf44Q3UHJ8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf44Q3UHJ8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf44Q3UHJ8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf44Q3UHJ8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf44Q3UHJ8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf44Q3UHJ8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf44Q3UHJ8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf44Q3UHJ8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf44Q3UHJ8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rnf44Q3UHJ8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf44Q3UHJ8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf44Q3UHJ8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf44Q3UHJ8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf44Q3UHJ8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rnf44Q3UHJ8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf44Q3UHJ8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf44Q3UHJ8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf44Q3UHJ8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf44Q3UHJ8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.63■□□□□ 0.41
Rnf44Q3UHJ8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf44Q3UHJ8 Gm22325-201ENSMUST00000158904 308 ntBASIC17.63■□□□□ 0.41
Rnf44Q3UHJ8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rnf44Q3UHJ8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rnf44Q3UHJ8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf44Q3UHJ8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf44Q3UHJ8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf44Q3UHJ8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf44Q3UHJ8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf44Q3UHJ8 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.62■□□□□ 0.41
Rnf44Q3UHJ8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf44Q3UHJ8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf44Q3UHJ8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf44Q3UHJ8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf44Q3UHJ8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf44Q3UHJ8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf44Q3UHJ8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf44Q3UHJ8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rnf44Q3UHJ8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rnf44Q3UHJ8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.61■□□□□ 0.41
Rnf44Q3UHJ8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf44Q3UHJ8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf44Q3UHJ8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.61■□□□□ 0.41
Rnf44Q3UHJ8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rnf44Q3UHJ8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.61■□□□□ 0.41
Rnf44Q3UHJ8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf44Q3UHJ8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf44Q3UHJ8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf44Q3UHJ8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf44Q3UHJ8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rnf44Q3UHJ8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf44Q3UHJ8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms