Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx27Q3UHD6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx27Q3UHD6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx27Q3UHD6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx27Q3UHD6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Snx27Q3UHD6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snx27Q3UHD6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snx27Q3UHD6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snx27Q3UHD6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snx27Q3UHD6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.77■□□□□ 0.76
Snx27Q3UHD6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.77■□□□□ 0.76
Snx27Q3UHD6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.77■□□□□ 0.76
Snx27Q3UHD6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snx27Q3UHD6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Snx27Q3UHD6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snx27Q3UHD6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Snx27Q3UHD6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.77■□□□□ 0.76
Snx27Q3UHD6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.77■□□□□ 0.75
Snx27Q3UHD6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx27Q3UHD6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx27Q3UHD6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx27Q3UHD6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.76■□□□□ 0.75
Snx27Q3UHD6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Snx27Q3UHD6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx27Q3UHD6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Snx27Q3UHD6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx27Q3UHD6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx27Q3UHD6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx27Q3UHD6 Gm15375-201ENSMUST00000119510 849 ntBASIC19.75■□□□□ 0.75
Snx27Q3UHD6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx27Q3UHD6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.75■□□□□ 0.75
Snx27Q3UHD6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx27Q3UHD6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx27Q3UHD6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx27Q3UHD6 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.75■□□□□ 0.75
Snx27Q3UHD6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx27Q3UHD6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx27Q3UHD6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx27Q3UHD6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx27Q3UHD6 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.74■□□□□ 0.75
Snx27Q3UHD6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.74■□□□□ 0.75
Snx27Q3UHD6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.74■□□□□ 0.75
Snx27Q3UHD6 Mir6982-201ENSMUST00000184354 68 ntBASIC19.74■□□□□ 0.75
Snx27Q3UHD6 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.74■□□□□ 0.75
Snx27Q3UHD6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.74■□□□□ 0.75
Snx27Q3UHD6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx27Q3UHD6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx27Q3UHD6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx27Q3UHD6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx27Q3UHD6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx27Q3UHD6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx27Q3UHD6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx27Q3UHD6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx27Q3UHD6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Snx27Q3UHD6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Snx27Q3UHD6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Snx27Q3UHD6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.73■□□□□ 0.75
Snx27Q3UHD6 Mir1199-201ENSMUST00000117015 119 ntBASIC19.73■□□□□ 0.75
Snx27Q3UHD6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.73■□□□□ 0.75
Snx27Q3UHD6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Snx27Q3UHD6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Snx27Q3UHD6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Snx27Q3UHD6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.73■□□□□ 0.75
Snx27Q3UHD6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx27Q3UHD6 Gm715-201ENSMUST00000117865 831 ntBASIC19.72■□□□□ 0.75
Snx27Q3UHD6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx27Q3UHD6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.72■□□□□ 0.75
Snx27Q3UHD6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Snx27Q3UHD6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Snx27Q3UHD6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Snx27Q3UHD6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx27Q3UHD6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx27Q3UHD6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Snx27Q3UHD6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Snx27Q3UHD6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.71■□□□□ 0.75
Snx27Q3UHD6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx27Q3UHD6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Snx27Q3UHD6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx27Q3UHD6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx27Q3UHD6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Snx27Q3UHD6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx27Q3UHD6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx27Q3UHD6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx27Q3UHD6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx27Q3UHD6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
Snx27Q3UHD6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.7■□□□□ 0.74
Snx27Q3UHD6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx27Q3UHD6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Snx27Q3UHD6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.7■□□□□ 0.74
Snx27Q3UHD6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx27Q3UHD6 Gm18025-201ENSMUST00000221733 862 ntBASIC19.7■□□□□ 0.74
Snx27Q3UHD6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Snx27Q3UHD6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx27Q3UHD6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx27Q3UHD6 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.7■□□□□ 0.74
Snx27Q3UHD6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx27Q3UHD6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Snx27Q3UHD6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx27Q3UHD6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx27Q3UHD6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms