Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col5a2Q3U962 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col5a2Q3U962 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.83■■□□□ 1.08
Col5a2Q3U962 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col5a2Q3U962 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col5a2Q3U962 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col5a2Q3U962 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col5a2Q3U962 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col5a2Q3U962 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col5a2Q3U962 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col5a2Q3U962 Gm14859-201ENSMUST00000117752 357 ntBASIC21.82■■□□□ 1.08
Col5a2Q3U962 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col5a2Q3U962 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC21.82■■□□□ 1.08
Col5a2Q3U962 Mir5130-201ENSMUST00000175160 84 ntBASIC21.82■■□□□ 1.08
Col5a2Q3U962 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col5a2Q3U962 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col5a2Q3U962 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col5a2Q3U962 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col5a2Q3U962 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Col5a2Q3U962 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col5a2Q3U962 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Col5a2Q3U962 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Col5a2Q3U962 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.81■■□□□ 1.08
Col5a2Q3U962 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col5a2Q3U962 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col5a2Q3U962 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col5a2Q3U962 Gm7284-201ENSMUST00000131667 944 ntBASIC21.81■■□□□ 1.08
Col5a2Q3U962 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC21.81■■□□□ 1.08
Col5a2Q3U962 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Col5a2Q3U962 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col5a2Q3U962 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col5a2Q3U962 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col5a2Q3U962 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Col5a2Q3U962 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col5a2Q3U962 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.81■■□□□ 1.08
Col5a2Q3U962 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col5a2Q3U962 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col5a2Q3U962 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col5a2Q3U962 Gm38027-201ENSMUST00000192315 235 ntBASIC21.8■■□□□ 1.08
Col5a2Q3U962 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col5a2Q3U962 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
Col5a2Q3U962 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col5a2Q3U962 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col5a2Q3U962 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col5a2Q3U962 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Col5a2Q3U962 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col5a2Q3U962 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col5a2Q3U962 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col5a2Q3U962 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC21.79■■□□□ 1.08
Col5a2Q3U962 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
Col5a2Q3U962 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col5a2Q3U962 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col5a2Q3U962 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col5a2Q3U962 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.79■■□□□ 1.08
Col5a2Q3U962 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Col5a2Q3U962 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col5a2Q3U962 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col5a2Q3U962 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Col5a2Q3U962 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Col5a2Q3U962 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Col5a2Q3U962 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col5a2Q3U962 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col5a2Q3U962 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
Col5a2Q3U962 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Col5a2Q3U962 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col5a2Q3U962 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col5a2Q3U962 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col5a2Q3U962 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col5a2Q3U962 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col5a2Q3U962 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Col5a2Q3U962 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col5a2Q3U962 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col5a2Q3U962 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col5a2Q3U962 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col5a2Q3U962 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col5a2Q3U962 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col5a2Q3U962 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.77■■□□□ 1.07
Col5a2Q3U962 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Col5a2Q3U962 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.76■■□□□ 1.07
Col5a2Q3U962 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col5a2Q3U962 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Col5a2Q3U962 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.76■■□□□ 1.07
Col5a2Q3U962 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.76■■□□□ 1.07
Col5a2Q3U962 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC21.76■■□□□ 1.07
Col5a2Q3U962 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC21.76■■□□□ 1.07
Col5a2Q3U962 Gm28033-201ENSMUST00000184224 96 ntBASIC21.76■■□□□ 1.07
Col5a2Q3U962 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col5a2Q3U962 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col5a2Q3U962 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Col5a2Q3U962 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col5a2Q3U962 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col5a2Q3U962 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21.75■■□□□ 1.07
Col5a2Q3U962 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col5a2Q3U962 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col5a2Q3U962 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Col5a2Q3U962 Gm22697-201ENSMUST00000175194 63 ntBASIC21.75■■□□□ 1.07
Col5a2Q3U962 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Col5a2Q3U962 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col5a2Q3U962 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col5a2Q3U962 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms