Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim72Q1XH17 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim72Q1XH17 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim72Q1XH17 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim72Q1XH17 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim72Q1XH17 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim72Q1XH17 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim72Q1XH17 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim72Q1XH17 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim72Q1XH17 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim72Q1XH17 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trim72Q1XH17 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trim72Q1XH17 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim72Q1XH17 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim72Q1XH17 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim72Q1XH17 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim72Q1XH17 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim72Q1XH17 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim72Q1XH17 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim72Q1XH17 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim72Q1XH17 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.47■□□□□ 0.71
Trim72Q1XH17 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.46■□□□□ 0.71
Trim72Q1XH17 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Trim72Q1XH17 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.46■□□□□ 0.71
Trim72Q1XH17 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
Trim72Q1XH17 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.46■□□□□ 0.71
Trim72Q1XH17 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.46■□□□□ 0.71
Trim72Q1XH17 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim72Q1XH17 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim72Q1XH17 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim72Q1XH17 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim72Q1XH17 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Trim72Q1XH17 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim72Q1XH17 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim72Q1XH17 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim72Q1XH17 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim72Q1XH17 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim72Q1XH17 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim72Q1XH17 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim72Q1XH17 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trim72Q1XH17 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim72Q1XH17 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim72Q1XH17 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trim72Q1XH17 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim72Q1XH17 Gm13148-201ENSMUST00000118892 745 ntBASIC19.45■□□□□ 0.7
Trim72Q1XH17 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim72Q1XH17 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.45■□□□□ 0.7
Trim72Q1XH17 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim72Q1XH17 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trim72Q1XH17 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim72Q1XH17 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim72Q1XH17 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim72Q1XH17 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.44■□□□□ 0.7
Trim72Q1XH17 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim72Q1XH17 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Trim72Q1XH17 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Trim72Q1XH17 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim72Q1XH17 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim72Q1XH17 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim72Q1XH17 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trim72Q1XH17 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim72Q1XH17 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim72Q1XH17 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Trim72Q1XH17 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim72Q1XH17 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim72Q1XH17 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim72Q1XH17 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim72Q1XH17 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim72Q1XH17 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim72Q1XH17 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim72Q1XH17 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim72Q1XH17 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trim72Q1XH17 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim72Q1XH17 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim72Q1XH17 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim72Q1XH17 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.43■□□□□ 0.7
Trim72Q1XH17 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trim72Q1XH17 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.43■□□□□ 0.7
Trim72Q1XH17 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.43■□□□□ 0.7
Trim72Q1XH17 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim72Q1XH17 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim72Q1XH17 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim72Q1XH17 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim72Q1XH17 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim72Q1XH17 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim72Q1XH17 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim72Q1XH17 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim72Q1XH17 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim72Q1XH17 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim72Q1XH17 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Trim72Q1XH17 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim72Q1XH17 Gm26524-201ENSMUST00000192339 390 ntBASIC19.42■□□□□ 0.7
Trim72Q1XH17 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim72Q1XH17 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim72Q1XH17 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.42■□□□□ 0.7
Trim72Q1XH17 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim72Q1XH17 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim72Q1XH17 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trim72Q1XH17 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim72Q1XH17 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms