Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
GabpaQ00422 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.76■□□□□ 0.91
GabpaQ00422 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.76■□□□□ 0.91
GabpaQ00422 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GabpaQ00422 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GabpaQ00422 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GabpaQ00422 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GabpaQ00422 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GabpaQ00422 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.76■□□□□ 0.91
GabpaQ00422 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GabpaQ00422 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GabpaQ00422 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GabpaQ00422 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.76■□□□□ 0.91
GabpaQ00422 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GabpaQ00422 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GabpaQ00422 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
GabpaQ00422 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GabpaQ00422 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GabpaQ00422 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GabpaQ00422 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
GabpaQ00422 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.76■□□□□ 0.91
GabpaQ00422 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.75■□□□□ 0.91
GabpaQ00422 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GabpaQ00422 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GabpaQ00422 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GabpaQ00422 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
GabpaQ00422 Gm15375-201ENSMUST00000119510 849 ntBASIC20.75■□□□□ 0.91
GabpaQ00422 Mir5122-201ENSMUST00000175004 89 ntBASIC20.75■□□□□ 0.91
GabpaQ00422 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.75■□□□□ 0.91
GabpaQ00422 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.75■□□□□ 0.91
GabpaQ00422 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.75■□□□□ 0.91
GabpaQ00422 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GabpaQ00422 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.75■□□□□ 0.91
GabpaQ00422 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
GabpaQ00422 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
GabpaQ00422 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.75■□□□□ 0.91
GabpaQ00422 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GabpaQ00422 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GabpaQ00422 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GabpaQ00422 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GabpaQ00422 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GabpaQ00422 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
GabpaQ00422 Gm43183-201ENSMUST00000200632 547 ntBASIC20.74■□□□□ 0.91
GabpaQ00422 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GabpaQ00422 Gm18025-201ENSMUST00000221733 862 ntBASIC20.74■□□□□ 0.91
GabpaQ00422 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.74■□□□□ 0.91
GabpaQ00422 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GabpaQ00422 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GabpaQ00422 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GabpaQ00422 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GabpaQ00422 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GabpaQ00422 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.74■□□□□ 0.91
GabpaQ00422 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
GabpaQ00422 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GabpaQ00422 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GabpaQ00422 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GabpaQ00422 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
GabpaQ00422 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
GabpaQ00422 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.73■□□□□ 0.91
GabpaQ00422 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
GabpaQ00422 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
GabpaQ00422 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.73■□□□□ 0.91
GabpaQ00422 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.73■□□□□ 0.91
GabpaQ00422 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GabpaQ00422 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
GabpaQ00422 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GabpaQ00422 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
GabpaQ00422 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GabpaQ00422 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.73■□□□□ 0.91
GabpaQ00422 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GabpaQ00422 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.72■□□□□ 0.91
GabpaQ00422 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.72■□□□□ 0.91
GabpaQ00422 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GabpaQ00422 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GabpaQ00422 Gm15565-201ENSMUST00000118890 427 ntBASIC20.72■□□□□ 0.91
GabpaQ00422 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GabpaQ00422 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
GabpaQ00422 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.72■□□□□ 0.91
GabpaQ00422 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GabpaQ00422 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GabpaQ00422 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GabpaQ00422 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GabpaQ00422 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GabpaQ00422 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GabpaQ00422 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GabpaQ00422 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
GabpaQ00422 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.71■□□□□ 0.91
GabpaQ00422 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
GabpaQ00422 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GabpaQ00422 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
GabpaQ00422 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
GabpaQ00422 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GabpaQ00422 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.71■□□□□ 0.91
GabpaQ00422 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.71■□□□□ 0.91
GabpaQ00422 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GabpaQ00422 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GabpaQ00422 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
GabpaQ00422 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GabpaQ00422 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GabpaQ00422 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms