Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx3-2P97503 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Nkx3-2P97503 Dio3-201ENSMUST00000097228 1449 ntBASIC17.21■□□□□ 0.34
Nkx3-2P97503 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Gm2559-201ENSMUST00000201323 363 ntBASIC17.2■□□□□ 0.34
Nkx3-2P97503 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.2■□□□□ 0.34
Nkx3-2P97503 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx3-2P97503 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx3-2P97503 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Nkx3-2P97503 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx3-2P97503 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.19■□□□□ 0.34
Nkx3-2P97503 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx3-2P97503 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx3-2P97503 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx3-2P97503 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.19■□□□□ 0.34
Nkx3-2P97503 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx3-2P97503 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx3-2P97503 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Nkx3-2P97503 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx3-2P97503 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx3-2P97503 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx3-2P97503 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx3-2P97503 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx3-2P97503 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx3-2P97503 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx3-2P97503 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx3-2P97503 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.18■□□□□ 0.34
Nkx3-2P97503 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx3-2P97503 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx3-2P97503 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx3-2P97503 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx3-2P97503 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Nkx3-2P97503 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Gm12896-201ENSMUST00000118430 226 ntBASIC17.17■□□□□ 0.34
Nkx3-2P97503 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx3-2P97503 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx3-2P97503 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx3-2P97503 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx3-2P97503 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx3-2P97503 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx3-2P97503 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx3-2P97503 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx3-2P97503 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms