Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcaP82350 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SgcaP82350 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcaP82350 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcaP82350 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcaP82350 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcaP82350 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SgcaP82350 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcaP82350 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.29■□□□□ 0.04
SgcaP82350 Gm15546-201ENSMUST00000122095 826 ntBASIC15.29■□□□□ 0.04
SgcaP82350 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SgcaP82350 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
SgcaP82350 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SgcaP82350 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcaP82350 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcaP82350 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.28■□□□□ 0.04
SgcaP82350 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.28■□□□□ 0.04
SgcaP82350 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.28■□□□□ 0.04
SgcaP82350 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.28■□□□□ 0.04
SgcaP82350 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SgcaP82350 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.28■□□□□ 0.04
SgcaP82350 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.27■□□□□ 0.04
SgcaP82350 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.27■□□□□ 0.04
SgcaP82350 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
SgcaP82350 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SgcaP82350 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SgcaP82350 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SgcaP82350 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SgcaP82350 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
SgcaP82350 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.27■□□□□ 0.04
SgcaP82350 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SgcaP82350 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SgcaP82350 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SgcaP82350 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SgcaP82350 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SgcaP82350 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SgcaP82350 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SgcaP82350 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcaP82350 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcaP82350 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.26■□□□□ 0.03
SgcaP82350 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcaP82350 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcaP82350 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcaP82350 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SgcaP82350 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.26■□□□□ 0.03
SgcaP82350 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcaP82350 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.26■□□□□ 0.03
SgcaP82350 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SgcaP82350 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcaP82350 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SgcaP82350 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcaP82350 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.25■□□□□ 0.03
SgcaP82350 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SgcaP82350 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SgcaP82350 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SgcaP82350 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SgcaP82350 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SgcaP82350 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.25■□□□□ 0.03
SgcaP82350 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
SgcaP82350 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SgcaP82350 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SgcaP82350 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SgcaP82350 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
SgcaP82350 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SgcaP82350 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SgcaP82350 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SgcaP82350 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SgcaP82350 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SgcaP82350 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcaP82350 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcaP82350 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SgcaP82350 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.24■□□□□ 0.03
SgcaP82350 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SgcaP82350 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcaP82350 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SgcaP82350 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcaP82350 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SgcaP82350 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcaP82350 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms