Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.79■□□□□ 0.6
Msx3P70354 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msx3P70354 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msx3P70354 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msx3P70354 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msx3P70354 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msx3P70354 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msx3P70354 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Msx3P70354 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Msx3P70354 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Msx3P70354 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.78■□□□□ 0.6
Msx3P70354 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Msx3P70354 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msx3P70354 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msx3P70354 Gm22325-201ENSMUST00000158904 308 ntBASIC18.78■□□□□ 0.6
Msx3P70354 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msx3P70354 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
Msx3P70354 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Msx3P70354 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.78■□□□□ 0.6
Msx3P70354 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msx3P70354 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msx3P70354 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.78■□□□□ 0.6
Msx3P70354 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msx3P70354 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msx3P70354 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.77■□□□□ 0.6
Msx3P70354 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Msx3P70354 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msx3P70354 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msx3P70354 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msx3P70354 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.77■□□□□ 0.6
Msx3P70354 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
Msx3P70354 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Msx3P70354 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msx3P70354 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.77■□□□□ 0.6
Msx3P70354 AV356131-201ENSMUST00000206201 750 ntBASIC18.77■□□□□ 0.6
Msx3P70354 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.77■□□□□ 0.6
Msx3P70354 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Msx3P70354 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.77■□□□□ 0.6
Msx3P70354 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Msx3P70354 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.77■□□□□ 0.59
Msx3P70354 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Msx3P70354 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msx3P70354 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Msx3P70354 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msx3P70354 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msx3P70354 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Msx3P70354 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msx3P70354 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msx3P70354 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.76■□□□□ 0.59
Msx3P70354 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
Msx3P70354 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.76■□□□□ 0.59
Msx3P70354 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.76■□□□□ 0.59
Msx3P70354 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.76■□□□□ 0.59
Msx3P70354 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Msx3P70354 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Msx3P70354 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msx3P70354 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Msx3P70354 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msx3P70354 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msx3P70354 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
Msx3P70354 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Msx3P70354 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.75■□□□□ 0.59
Msx3P70354 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Msx3P70354 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msx3P70354 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Msx3P70354 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msx3P70354 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msx3P70354 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msx3P70354 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msx3P70354 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msx3P70354 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msx3P70354 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Msx3P70354 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.74■□□□□ 0.59
Msx3P70354 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.74■□□□□ 0.59
Msx3P70354 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.74■□□□□ 0.59
Msx3P70354 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Msx3P70354 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.74■□□□□ 0.59
Msx3P70354 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msx3P70354 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msx3P70354 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msx3P70354 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msx3P70354 Tgds-204ENSMUST00000228543 1594 ntBASIC18.73■□□□□ 0.59
Msx3P70354 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msx3P70354 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msx3P70354 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.73■□□□□ 0.59
Msx3P70354 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msx3P70354 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Msx3P70354 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.73■□□□□ 0.59
Msx3P70354 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msx3P70354 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msx3P70354 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msx3P70354 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msx3P70354 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Msx3P70354 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msx3P70354 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msx3P70354 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msx3P70354 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msx3P70354 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msx3P70354 Gm18284-201ENSMUST00000172604 624 ntBASIC18.72■□□□□ 0.59
Msx3P70354 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms