Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim4P70271 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim4P70271 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.16■□□□□ 0.02
Pdlim4P70271 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim4P70271 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim4P70271 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim4P70271 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim4P70271 Gm12933-201ENSMUST00000120203 872 ntBASIC15.16■□□□□ 0.02
Pdlim4P70271 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pdlim4P70271 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Pdlim4P70271 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim4P70271 Gm10602-201ENSMUST00000098239 609 ntBASIC15.16■□□□□ 0.02
Pdlim4P70271 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim4P70271 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim4P70271 Rarb-207ENSMUST00000225921 2756 ntBASIC15.16■□□□□ 0.02
Pdlim4P70271 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pdlim4P70271 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.16■□□□□ 0.02
Pdlim4P70271 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim4P70271 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pdlim4P70271 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim4P70271 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pdlim4P70271 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim4P70271 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Pdlim4P70271 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim4P70271 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim4P70271 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim4P70271 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim4P70271 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.15■□□□□ 0.02
Pdlim4P70271 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim4P70271 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pdlim4P70271 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pdlim4P70271 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.15■□□□□ 0.02
Pdlim4P70271 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim4P70271 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim4P70271 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim4P70271 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim4P70271 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim4P70271 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim4P70271 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim4P70271 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim4P70271 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim4P70271 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.15■□□□□ 0.02
Pdlim4P70271 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim4P70271 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pdlim4P70271 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pdlim4P70271 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Pdlim4P70271 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Pdlim4P70271 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.14■□□□□ 0.01
Pdlim4P70271 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.14■□□□□ 0.01
Pdlim4P70271 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.14■□□□□ 0.01
Pdlim4P70271 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.14■□□□□ 0.01
Pdlim4P70271 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.14■□□□□ 0.01
Pdlim4P70271 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pdlim4P70271 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.14■□□□□ 0.01
Pdlim4P70271 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim4P70271 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim4P70271 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim4P70271 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.13■□□□□ 0.01
Pdlim4P70271 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pdlim4P70271 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim4P70271 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim4P70271 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim4P70271 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.13■□□□□ 0.01
Pdlim4P70271 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.13■□□□□ 0.01
Pdlim4P70271 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim4P70271 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.13■□□□□ 0.01
Pdlim4P70271 BC021767-201ENSMUST00000126387 1716 ntBASIC15.13■□□□□ 0.01
Pdlim4P70271 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim4P70271 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.13■□□□□ 0.01
Pdlim4P70271 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim4P70271 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim4P70271 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pdlim4P70271 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pdlim4P70271 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim4P70271 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim4P70271 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim4P70271 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms