Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ThraP63058 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.45■□□□□ 0.54
ThraP63058 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ThraP63058 Gm5408-201ENSMUST00000197998 747 ntBASIC18.45■□□□□ 0.54
ThraP63058 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ThraP63058 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
ThraP63058 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ThraP63058 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
ThraP63058 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
ThraP63058 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ThraP63058 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ThraP63058 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
ThraP63058 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ThraP63058 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
ThraP63058 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ThraP63058 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ThraP63058 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ThraP63058 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ThraP63058 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ThraP63058 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.44■□□□□ 0.54
ThraP63058 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ThraP63058 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ThraP63058 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.44■□□□□ 0.54
ThraP63058 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ThraP63058 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.44■□□□□ 0.54
ThraP63058 Gm6211-202ENSMUST00000167849 925 ntBASIC18.44■□□□□ 0.54
ThraP63058 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ThraP63058 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ThraP63058 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ThraP63058 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ThraP63058 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ThraP63058 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ThraP63058 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ThraP63058 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ThraP63058 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ThraP63058 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ThraP63058 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ThraP63058 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ThraP63058 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ThraP63058 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ThraP63058 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ThraP63058 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.43■□□□□ 0.54
ThraP63058 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ThraP63058 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ThraP63058 Gm12527-201ENSMUST00000117967 564 ntBASIC18.43■□□□□ 0.54
ThraP63058 Gm7860-201ENSMUST00000121190 879 ntBASIC18.43■□□□□ 0.54
ThraP63058 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ThraP63058 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ThraP63058 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.43■□□□□ 0.54
ThraP63058 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ThraP63058 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.43■□□□□ 0.54
ThraP63058 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.43■□□□□ 0.54
ThraP63058 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ThraP63058 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ThraP63058 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.43■□□□□ 0.54
ThraP63058 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ThraP63058 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ThraP63058 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ThraP63058 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ThraP63058 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.42■□□□□ 0.54
ThraP63058 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ThraP63058 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ThraP63058 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.42■□□□□ 0.54
ThraP63058 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ThraP63058 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ThraP63058 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ThraP63058 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ThraP63058 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ThraP63058 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ThraP63058 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ThraP63058 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ThraP63058 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.41■□□□□ 0.54
ThraP63058 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ThraP63058 Gm20760-201ENSMUST00000179197 648 ntBASIC18.41■□□□□ 0.54
ThraP63058 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ThraP63058 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ThraP63058 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ThraP63058 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ThraP63058 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ThraP63058 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ThraP63058 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ThraP63058 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ThraP63058 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ThraP63058 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ThraP63058 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ThraP63058 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ThraP63058 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ThraP63058 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.4■□□□□ 0.54
ThraP63058 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ThraP63058 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ThraP63058 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ThraP63058 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ThraP63058 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ThraP63058 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ThraP63058 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ThraP63058 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ThraP63058 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ThraP63058 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ThraP63058 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ThraP63058 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms