Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lhx1P63006 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lhx1P63006 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.96■□□□□ 0.47
Lhx1P63006 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lhx1P63006 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lhx1P63006 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Lhx1P63006 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Lhx1P63006 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lhx1P63006 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lhx1P63006 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lhx1P63006 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Lhx1P63006 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lhx1P63006 Gm5643-201ENSMUST00000117081 966 ntBASIC17.95■□□□□ 0.46
Lhx1P63006 Gm13158-201ENSMUST00000122007 736 ntBASIC17.95■□□□□ 0.46
Lhx1P63006 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lhx1P63006 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lhx1P63006 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lhx1P63006 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lhx1P63006 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lhx1P63006 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lhx1P63006 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lhx1P63006 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lhx1P63006 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lhx1P63006 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Lhx1P63006 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.94■□□□□ 0.46
Lhx1P63006 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Lhx1P63006 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Lhx1P63006 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.94■□□□□ 0.46
Lhx1P63006 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lhx1P63006 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Lhx1P63006 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lhx1P63006 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lhx1P63006 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Lhx1P63006 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lhx1P63006 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.93■□□□□ 0.46
Lhx1P63006 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lhx1P63006 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.93■□□□□ 0.46
Lhx1P63006 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lhx1P63006 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lhx1P63006 Gm38285-201ENSMUST00000192928 922 ntBASIC17.93■□□□□ 0.46
Lhx1P63006 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Lhx1P63006 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Lhx1P63006 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lhx1P63006 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Lhx1P63006 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lhx1P63006 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lhx1P63006 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lhx1P63006 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lhx1P63006 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lhx1P63006 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lhx1P63006 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lhx1P63006 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lhx1P63006 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lhx1P63006 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lhx1P63006 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Lhx1P63006 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lhx1P63006 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lhx1P63006 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lhx1P63006 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx1P63006 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx1P63006 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.91■□□□□ 0.46
Lhx1P63006 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx1P63006 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx1P63006 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx1P63006 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx1P63006 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Lhx1P63006 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.91■□□□□ 0.46
Lhx1P63006 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.91■□□□□ 0.46
Lhx1P63006 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx1P63006 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.91■□□□□ 0.46
Lhx1P63006 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx1P63006 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Lhx1P63006 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Lhx1P63006 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Lhx1P63006 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx1P63006 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Lhx1P63006 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx1P63006 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Lhx1P63006 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx1P63006 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx1P63006 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx1P63006 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx1P63006 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx1P63006 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.9■□□□□ 0.46
Lhx1P63006 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx1P63006 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.9■□□□□ 0.46
Lhx1P63006 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx1P63006 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx1P63006 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx1P63006 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx1P63006 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx1P63006 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx1P63006 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx1P63006 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Lhx1P63006 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.89■□□□□ 0.46
Lhx1P63006 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Lhx1P63006 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx1P63006 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx1P63006 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx1P63006 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms