Protein–RNA interactions for Protein: P61358

Rpl27, 60S ribosomal protein L27, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl27P61358 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl27P61358 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rpl27P61358 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl27P61358 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.31■□□□□ 0.2
Rpl27P61358 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl27P61358 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl27P61358 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rpl27P61358 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl27P61358 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl27P61358 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Rpl27P61358 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl27P61358 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl27P61358 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl27P61358 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Rpl27P61358 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl27P61358 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rpl27P61358 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.3■□□□□ 0.2
Rpl27P61358 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rpl27P61358 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl27P61358 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl27P61358 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl27P61358 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl27P61358 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl27P61358 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl27P61358 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl27P61358 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
Rpl27P61358 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl27P61358 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl27P61358 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl27P61358 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rpl27P61358 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rpl27P61358 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl27P61358 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl27P61358 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Rpl27P61358 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl27P61358 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.29■□□□□ 0.2
Rpl27P61358 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl27P61358 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl27P61358 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.29■□□□□ 0.2
Rpl27P61358 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl27P61358 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.29■□□□□ 0.2
Rpl27P61358 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl27P61358 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl27P61358 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl27P61358 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl27P61358 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl27P61358 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl27P61358 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.29■□□□□ 0.2
Rpl27P61358 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl27P61358 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rpl27P61358 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.29■□□□□ 0.2
Rpl27P61358 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl27P61358 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.28■□□□□ 0.2
Rpl27P61358 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl27P61358 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl27P61358 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
Rpl27P61358 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
Rpl27P61358 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl27P61358 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl27P61358 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rpl27P61358 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl27P61358 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.28■□□□□ 0.2
Rpl27P61358 AV356131-201ENSMUST00000206201 750 ntBASIC16.28■□□□□ 0.2
Rpl27P61358 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl27P61358 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl27P61358 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl27P61358 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Rpl27P61358 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl27P61358 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl27P61358 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl27P61358 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl27P61358 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rpl27P61358 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl27P61358 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl27P61358 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl27P61358 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl27P61358 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rpl27P61358 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl27P61358 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.27■□□□□ 0.2
Rpl27P61358 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Rpl27P61358 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpl27P61358 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpl27P61358 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpl27P61358 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpl27P61358 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.27■□□□□ 0.19
Rpl27P61358 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.27■□□□□ 0.19
Rpl27P61358 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl27P61358 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rpl27P61358 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.26■□□□□ 0.19
Rpl27P61358 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl27P61358 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl27P61358 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.26■□□□□ 0.19
Rpl27P61358 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rpl27P61358 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl27P61358 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl27P61358 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl27P61358 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl27P61358 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl27P61358 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Rpl27P61358 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms