Protein–RNA interactions for Protein: P60229

Eif3e, Eukaryotic translation initiation factor 3 subunit E, mousemouse

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eif3eP60229 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Eif3eP60229 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Eif3eP60229 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Eif3eP60229 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Eif3eP60229 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Eif3eP60229 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
Eif3eP60229 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Eif3eP60229 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Eif3eP60229 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Eif3eP60229 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Eif3eP60229 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Eif3eP60229 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.85■□□□□ 0.61
Eif3eP60229 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Eif3eP60229 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Eif3eP60229 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Eif3eP60229 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Eif3eP60229 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Eif3eP60229 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Eif3eP60229 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
Eif3eP60229 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Eif3eP60229 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Eif3eP60229 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.84■□□□□ 0.61
Eif3eP60229 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Eif3eP60229 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.84■□□□□ 0.61
Eif3eP60229 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Eif3eP60229 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.84■□□□□ 0.61
Eif3eP60229 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Eif3eP60229 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.83■□□□□ 0.61
Eif3eP60229 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Eif3eP60229 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Eif3eP60229 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Eif3eP60229 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Eif3eP60229 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Eif3eP60229 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Eif3eP60229 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Eif3eP60229 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Eif3eP60229 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Eif3eP60229 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Eif3eP60229 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Eif3eP60229 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Eif3eP60229 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Eif3eP60229 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Eif3eP60229 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Eif3eP60229 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Eif3eP60229 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.82■□□□□ 0.6
Eif3eP60229 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Eif3eP60229 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.82■□□□□ 0.6
Eif3eP60229 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Eif3eP60229 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Eif3eP60229 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.82■□□□□ 0.6
Eif3eP60229 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.82■□□□□ 0.6
Eif3eP60229 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.82■□□□□ 0.6
Eif3eP60229 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Eif3eP60229 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Eif3eP60229 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Eif3eP60229 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Eif3eP60229 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Eif3eP60229 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Eif3eP60229 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Eif3eP60229 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Eif3eP60229 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Eif3eP60229 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Eif3eP60229 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Eif3eP60229 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Eif3eP60229 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.81■□□□□ 0.6
Eif3eP60229 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.81■□□□□ 0.6
Eif3eP60229 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.81■□□□□ 0.6
Eif3eP60229 Gm6420-201ENSMUST00000193885 723 ntBASIC18.81■□□□□ 0.6
Eif3eP60229 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Eif3eP60229 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Eif3eP60229 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Eif3eP60229 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Eif3eP60229 Fst-202ENSMUST00000223640 2612 ntBASIC18.81■□□□□ 0.6
Eif3eP60229 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.81■□□□□ 0.6
Eif3eP60229 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Eif3eP60229 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Eif3eP60229 Nespas-201ENSMUST00000143738 1083 ntBASIC18.8■□□□□ 0.6
Eif3eP60229 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.8■□□□□ 0.6
Eif3eP60229 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Eif3eP60229 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Eif3eP60229 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Eif3eP60229 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Eif3eP60229 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Eif3eP60229 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Eif3eP60229 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.8■□□□□ 0.6
Eif3eP60229 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Eif3eP60229 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Eif3eP60229 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Eif3eP60229 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Eif3eP60229 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Eif3eP60229 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Eif3eP60229 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.79■□□□□ 0.6
Eif3eP60229 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.79■□□□□ 0.6
Eif3eP60229 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.79■□□□□ 0.6
Eif3eP60229 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Eif3eP60229 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Eif3eP60229 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Eif3eP60229 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Eif3eP60229 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Eif3eP60229 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms