Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tubgcp3P58854 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.65■□□□□ 0.58
Tubgcp3P58854 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tubgcp3P58854 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tubgcp3P58854 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.65■□□□□ 0.58
Tubgcp3P58854 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tubgcp3P58854 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Tubgcp3P58854 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tubgcp3P58854 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tubgcp3P58854 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tubgcp3P58854 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tubgcp3P58854 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.64■□□□□ 0.57
Tubgcp3P58854 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tubgcp3P58854 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tubgcp3P58854 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tubgcp3P58854 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.64■□□□□ 0.57
Tubgcp3P58854 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tubgcp3P58854 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tubgcp3P58854 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.63■□□□□ 0.57
Tubgcp3P58854 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Tubgcp3P58854 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubgcp3P58854 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubgcp3P58854 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubgcp3P58854 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Tubgcp3P58854 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubgcp3P58854 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.63■□□□□ 0.57
Tubgcp3P58854 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.63■□□□□ 0.57
Tubgcp3P58854 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubgcp3P58854 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubgcp3P58854 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubgcp3P58854 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tubgcp3P58854 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubgcp3P58854 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubgcp3P58854 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubgcp3P58854 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubgcp3P58854 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tubgcp3P58854 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubgcp3P58854 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubgcp3P58854 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.62■□□□□ 0.57
Tubgcp3P58854 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubgcp3P58854 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubgcp3P58854 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubgcp3P58854 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubgcp3P58854 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubgcp3P58854 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubgcp3P58854 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubgcp3P58854 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tubgcp3P58854 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubgcp3P58854 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tubgcp3P58854 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tubgcp3P58854 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tubgcp3P58854 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tubgcp3P58854 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tubgcp3P58854 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tubgcp3P58854 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Tubgcp3P58854 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tubgcp3P58854 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tubgcp3P58854 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tubgcp3P58854 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tubgcp3P58854 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Tubgcp3P58854 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tubgcp3P58854 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tubgcp3P58854 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tubgcp3P58854 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tubgcp3P58854 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tubgcp3P58854 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.6■□□□□ 0.57
Tubgcp3P58854 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Tubgcp3P58854 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.6■□□□□ 0.57
Tubgcp3P58854 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.6■□□□□ 0.57
Tubgcp3P58854 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tubgcp3P58854 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Tubgcp3P58854 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tubgcp3P58854 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tubgcp3P58854 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tubgcp3P58854 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.6■□□□□ 0.57
Tubgcp3P58854 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tubgcp3P58854 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Tubgcp3P58854 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tubgcp3P58854 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tubgcp3P58854 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tubgcp3P58854 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tubgcp3P58854 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.59■□□□□ 0.57
Tubgcp3P58854 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tubgcp3P58854 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tubgcp3P58854 Gm26571-201ENSMUST00000181399 666 ntBASIC18.59■□□□□ 0.57
Tubgcp3P58854 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.59■□□□□ 0.57
Tubgcp3P58854 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.59■□□□□ 0.57
Tubgcp3P58854 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tubgcp3P58854 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tubgcp3P58854 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.58■□□□□ 0.57
Tubgcp3P58854 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tubgcp3P58854 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tubgcp3P58854 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tubgcp3P58854 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Tubgcp3P58854 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tubgcp3P58854 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Tubgcp3P58854 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Tubgcp3P58854 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Tubgcp3P58854 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Tubgcp3P58854 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms