Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NrlP54846 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NrlP54846 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NrlP54846 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NrlP54846 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NrlP54846 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NrlP54846 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NrlP54846 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
NrlP54846 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NrlP54846 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.43■□□□□ 0.7
NrlP54846 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NrlP54846 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NrlP54846 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NrlP54846 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NrlP54846 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NrlP54846 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NrlP54846 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NrlP54846 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NrlP54846 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NrlP54846 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NrlP54846 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NrlP54846 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NrlP54846 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NrlP54846 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NrlP54846 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NrlP54846 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NrlP54846 Gm11643-201ENSMUST00000119578 864 ntBASIC19.42■□□□□ 0.7
NrlP54846 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.42■□□□□ 0.7
NrlP54846 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.42■□□□□ 0.7
NrlP54846 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NrlP54846 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
NrlP54846 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NrlP54846 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.42■□□□□ 0.7
NrlP54846 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NrlP54846 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NrlP54846 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NrlP54846 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.41■□□□□ 0.7
NrlP54846 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NrlP54846 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NrlP54846 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NrlP54846 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NrlP54846 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.41■□□□□ 0.7
NrlP54846 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.41■□□□□ 0.7
NrlP54846 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NrlP54846 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.41■□□□□ 0.7
NrlP54846 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NrlP54846 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NrlP54846 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NrlP54846 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NrlP54846 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NrlP54846 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NrlP54846 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NrlP54846 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.4■□□□□ 0.7
NrlP54846 Mir5122-201ENSMUST00000175004 89 ntBASIC19.4■□□□□ 0.7
NrlP54846 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NrlP54846 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NrlP54846 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NrlP54846 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NrlP54846 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NrlP54846 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
NrlP54846 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NrlP54846 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NrlP54846 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NrlP54846 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NrlP54846 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NrlP54846 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NrlP54846 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NrlP54846 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NrlP54846 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NrlP54846 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NrlP54846 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NrlP54846 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NrlP54846 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.39■□□□□ 0.69
NrlP54846 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NrlP54846 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NrlP54846 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NrlP54846 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NrlP54846 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.39■□□□□ 0.69
NrlP54846 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NrlP54846 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NrlP54846 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NrlP54846 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NrlP54846 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NrlP54846 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.38■□□□□ 0.69
NrlP54846 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NrlP54846 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NrlP54846 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.38■□□□□ 0.69
NrlP54846 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NrlP54846 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NrlP54846 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NrlP54846 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NrlP54846 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.38■□□□□ 0.69
NrlP54846 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NrlP54846 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NrlP54846 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NrlP54846 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NrlP54846 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NrlP54846 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NrlP54846 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NrlP54846 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms