Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sdc2P43407 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sdc2P43407 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sdc2P43407 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sdc2P43407 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Sdc2P43407 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sdc2P43407 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sdc2P43407 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sdc2P43407 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sdc2P43407 Fst-202ENSMUST00000223640 2612 ntBASIC20.5■□□□□ 0.87
Sdc2P43407 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sdc2P43407 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sdc2P43407 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Sdc2P43407 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Sdc2P43407 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sdc2P43407 Gm13234-201ENSMUST00000120010 747 ntBASIC20.49■□□□□ 0.87
Sdc2P43407 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.49■□□□□ 0.87
Sdc2P43407 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sdc2P43407 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sdc2P43407 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sdc2P43407 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sdc2P43407 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Sdc2P43407 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.49■□□□□ 0.87
Sdc2P43407 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.49■□□□□ 0.87
Sdc2P43407 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sdc2P43407 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.49■□□□□ 0.87
Sdc2P43407 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sdc2P43407 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sdc2P43407 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sdc2P43407 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdc2P43407 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.48■□□□□ 0.87
Sdc2P43407 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Sdc2P43407 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.48■□□□□ 0.87
Sdc2P43407 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sdc2P43407 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sdc2P43407 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.48■□□□□ 0.87
Sdc2P43407 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Sdc2P43407 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdc2P43407 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdc2P43407 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdc2P43407 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Sdc2P43407 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdc2P43407 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdc2P43407 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdc2P43407 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Sdc2P43407 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Sdc2P43407 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdc2P43407 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdc2P43407 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sdc2P43407 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Sdc2P43407 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sdc2P43407 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.47■□□□□ 0.87
Sdc2P43407 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Sdc2P43407 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdc2P43407 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdc2P43407 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdc2P43407 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdc2P43407 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdc2P43407 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.47■□□□□ 0.87
Sdc2P43407 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdc2P43407 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdc2P43407 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc2P43407 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Sdc2P43407 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc2P43407 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc2P43407 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc2P43407 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc2P43407 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.46■□□□□ 0.87
Sdc2P43407 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc2P43407 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.46■□□□□ 0.87
Sdc2P43407 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc2P43407 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Sdc2P43407 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Sdc2P43407 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.46■□□□□ 0.87
Sdc2P43407 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc2P43407 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Sdc2P43407 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.46■□□□□ 0.87
Sdc2P43407 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Sdc2P43407 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Sdc2P43407 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdc2P43407 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Sdc2P43407 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdc2P43407 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdc2P43407 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdc2P43407 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdc2P43407 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdc2P43407 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Sdc2P43407 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdc2P43407 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sdc2P43407 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Sdc2P43407 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdc2P43407 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Sdc2P43407 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdc2P43407 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdc2P43407 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdc2P43407 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdc2P43407 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdc2P43407 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdc2P43407 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sdc2P43407 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms