Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmx3P42581 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmx3P42581 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hmx3P42581 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Hmx3P42581 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmx3P42581 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmx3P42581 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.18■□□□□ 0.02
Hmx3P42581 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmx3P42581 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.18■□□□□ 0.02
Hmx3P42581 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Hmx3P42581 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmx3P42581 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmx3P42581 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Hmx3P42581 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Hmx3P42581 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmx3P42581 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmx3P42581 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmx3P42581 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmx3P42581 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmx3P42581 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmx3P42581 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Hmx3P42581 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmx3P42581 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmx3P42581 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmx3P42581 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Hmx3P42581 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.17■□□□□ 0.02
Hmx3P42581 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.17■□□□□ 0.02
Hmx3P42581 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Hmx3P42581 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Hmx3P42581 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmx3P42581 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmx3P42581 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmx3P42581 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.17■□□□□ 0.02
Hmx3P42581 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmx3P42581 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmx3P42581 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmx3P42581 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmx3P42581 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.17■□□□□ 0.02
Hmx3P42581 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmx3P42581 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmx3P42581 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Hmx3P42581 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.16■□□□□ 0.02
Hmx3P42581 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmx3P42581 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.16■□□□□ 0.02
Hmx3P42581 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmx3P42581 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmx3P42581 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmx3P42581 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmx3P42581 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmx3P42581 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmx3P42581 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmx3P42581 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmx3P42581 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hmx3P42581 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmx3P42581 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmx3P42581 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmx3P42581 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmx3P42581 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmx3P42581 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Hmx3P42581 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmx3P42581 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Hmx3P42581 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.15■□□□□ 0.02
Hmx3P42581 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Hmx3P42581 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Hmx3P42581 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Hmx3P42581 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmx3P42581 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmx3P42581 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmx3P42581 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.14■□□□□ 0.01
Hmx3P42581 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.14■□□□□ 0.01
Hmx3P42581 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmx3P42581 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.14■□□□□ 0.01
Hmx3P42581 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmx3P42581 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmx3P42581 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmx3P42581 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmx3P42581 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Hmx3P42581 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmx3P42581 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmx3P42581 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hmx3P42581 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmx3P42581 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hmx3P42581 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms