Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.1■□□□□ 0.01
Abca1P41233 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca1P41233 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca1P41233 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Abca1P41233 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca1P41233 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca1P41233 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca1P41233 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.1■□□□□ 0.01
Abca1P41233 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.1■□□□□ 0.01
Abca1P41233 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Abca1P41233 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca1P41233 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca1P41233 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca1P41233 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca1P41233 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca1P41233 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.09■□□□□ 0.01
Abca1P41233 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.09■□□□□ 0.01
Abca1P41233 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca1P41233 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Abca1P41233 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.09■□□□□ 0.01
Abca1P41233 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca1P41233 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca1P41233 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Abca1P41233 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca1P41233 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Abca1P41233 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.09■□□□□ 0.01
Abca1P41233 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca1P41233 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Abca1P41233 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Abca1P41233 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Abca1P41233 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.08■□□□□ 0
Abca1P41233 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Abca1P41233 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.08■□□□□ 0
Abca1P41233 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.08■□□□□ 0
Abca1P41233 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Abca1P41233 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.08■□□□□ 0
Abca1P41233 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.08■□□□□ 0
Abca1P41233 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Abca1P41233 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Abca1P41233 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Abca1P41233 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Abca1P41233 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Abca1P41233 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Abca1P41233 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.08■□□□□ 0
Abca1P41233 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.08■□□□□ 0
Abca1P41233 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.08■□□□□ 0
Abca1P41233 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.07■□□□□ 0
Abca1P41233 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.07■□□□□ 0
Abca1P41233 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abca1P41233 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abca1P41233 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.07■□□□□ 0
Abca1P41233 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.07■□□□□ 0
Abca1P41233 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.07■□□□□ 0
Abca1P41233 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abca1P41233 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abca1P41233 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Abca1P41233 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Abca1P41233 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abca1P41233 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abca1P41233 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abca1P41233 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abca1P41233 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.06■□□□□ 0
Abca1P41233 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Abca1P41233 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.06■□□□□ 0
Abca1P41233 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Abca1P41233 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.06■□□□□ 0
Abca1P41233 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abca1P41233 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abca1P41233 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abca1P41233 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abca1P41233 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.06■□□□□ 0
Abca1P41233 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.06■□□□□ 0
Abca1P41233 Gm10819-201ENSMUST00000099988 561 ntBASIC15.06■□□□□ 0
Abca1P41233 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.06■□□□□ 0
Abca1P41233 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abca1P41233 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Abca1P41233 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abca1P41233 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.06■□□□□ 0
Abca1P41233 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abca1P41233 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Abca1P41233 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abca1P41233 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Abca1P41233 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Abca1P41233 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Abca1P41233 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Abca1P41233 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Abca1P41233 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Abca1P41233 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.05■□□□□ 0
Abca1P41233 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Abca1P41233 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Abca1P41233 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Abca1P41233 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.05■□□□□ -0
Abca1P41233 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Abca1P41233 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Abca1P41233 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Abca1P41233 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.05■□□□□ -0
Abca1P41233 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.05■□□□□ -0
Abca1P41233 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.05■□□□□ -0
Abca1P41233 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Abca1P41233 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms