Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox6P40645 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sox6P40645 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Sox6P40645 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox6P40645 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sox6P40645 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sox6P40645 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox6P40645 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox6P40645 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox6P40645 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sox6P40645 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.13■□□□□ 0.33
Sox6P40645 Gm10493-201ENSMUST00000097270 612 ntBASIC17.13■□□□□ 0.33
Sox6P40645 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox6P40645 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox6P40645 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.13■□□□□ 0.33
Sox6P40645 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sox6P40645 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox6P40645 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox6P40645 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Sox6P40645 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sox6P40645 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox6P40645 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox6P40645 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox6P40645 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox6P40645 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.12■□□□□ 0.33
Sox6P40645 Gm9988-201ENSMUST00000069786 435 ntBASIC17.12■□□□□ 0.33
Sox6P40645 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox6P40645 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox6P40645 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox6P40645 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox6P40645 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.11■□□□□ 0.33
Sox6P40645 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox6P40645 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.11■□□□□ 0.33
Sox6P40645 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox6P40645 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sox6P40645 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox6P40645 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sox6P40645 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox6P40645 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox6P40645 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox6P40645 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox6P40645 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox6P40645 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.11■□□□□ 0.33
Sox6P40645 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox6P40645 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox6P40645 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox6P40645 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox6P40645 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Sox6P40645 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox6P40645 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox6P40645 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox6P40645 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox6P40645 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox6P40645 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sox6P40645 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox6P40645 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox6P40645 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.1■□□□□ 0.33
Sox6P40645 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.1■□□□□ 0.33
Sox6P40645 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox6P40645 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox6P40645 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox6P40645 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox6P40645 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox6P40645 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox6P40645 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox6P40645 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox6P40645 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Sox6P40645 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox6P40645 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox6P40645 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox6P40645 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Sox6P40645 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox6P40645 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox6P40645 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox6P40645 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox6P40645 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox6P40645 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.09■□□□□ 0.33
Sox6P40645 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sox6P40645 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox6P40645 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox6P40645 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox6P40645 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox6P40645 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox6P40645 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox6P40645 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox6P40645 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox6P40645 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.08■□□□□ 0.33
Sox6P40645 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.08■□□□□ 0.33
Sox6P40645 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox6P40645 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox6P40645 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.08■□□□□ 0.32
Sox6P40645 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
Sox6P40645 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox6P40645 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.08■□□□□ 0.32
Sox6P40645 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.08■□□□□ 0.32
Sox6P40645 Gm42778-201ENSMUST00000199644 553 ntBASIC17.08■□□□□ 0.32
Sox6P40645 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.08■□□□□ 0.32
Sox6P40645 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.08■□□□□ 0.32
Sox6P40645 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox6P40645 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms