Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LdlrP35951 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LdlrP35951 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LdlrP35951 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LdlrP35951 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LdlrP35951 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LdlrP35951 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LdlrP35951 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LdlrP35951 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LdlrP35951 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LdlrP35951 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LdlrP35951 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LdlrP35951 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.13■□□□□ 0.49
LdlrP35951 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LdlrP35951 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LdlrP35951 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LdlrP35951 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LdlrP35951 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LdlrP35951 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LdlrP35951 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LdlrP35951 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.12■□□□□ 0.49
LdlrP35951 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LdlrP35951 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LdlrP35951 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LdlrP35951 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LdlrP35951 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LdlrP35951 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.12■□□□□ 0.49
LdlrP35951 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.12■□□□□ 0.49
LdlrP35951 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.12■□□□□ 0.49
LdlrP35951 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LdlrP35951 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.12■□□□□ 0.49
LdlrP35951 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LdlrP35951 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.12■□□□□ 0.49
LdlrP35951 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LdlrP35951 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LdlrP35951 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LdlrP35951 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LdlrP35951 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.11■□□□□ 0.49
LdlrP35951 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LdlrP35951 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LdlrP35951 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.11■□□□□ 0.49
LdlrP35951 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.11■□□□□ 0.49
LdlrP35951 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.11■□□□□ 0.49
LdlrP35951 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.11■□□□□ 0.49
LdlrP35951 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LdlrP35951 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LdlrP35951 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LdlrP35951 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LdlrP35951 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
LdlrP35951 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LdlrP35951 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LdlrP35951 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LdlrP35951 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LdlrP35951 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LdlrP35951 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LdlrP35951 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LdlrP35951 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LdlrP35951 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LdlrP35951 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.1■□□□□ 0.49
LdlrP35951 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LdlrP35951 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LdlrP35951 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
LdlrP35951 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LdlrP35951 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LdlrP35951 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LdlrP35951 Fst-202ENSMUST00000223640 2612 ntBASIC18.1■□□□□ 0.49
LdlrP35951 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LdlrP35951 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.1■□□□□ 0.49
LdlrP35951 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.09■□□□□ 0.49
LdlrP35951 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LdlrP35951 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LdlrP35951 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LdlrP35951 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.09■□□□□ 0.49
LdlrP35951 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LdlrP35951 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LdlrP35951 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LdlrP35951 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.09■□□□□ 0.49
LdlrP35951 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.09■□□□□ 0.49
LdlrP35951 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LdlrP35951 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LdlrP35951 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.09■□□□□ 0.49
LdlrP35951 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LdlrP35951 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LdlrP35951 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LdlrP35951 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LdlrP35951 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LdlrP35951 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LdlrP35951 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
LdlrP35951 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LdlrP35951 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LdlrP35951 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LdlrP35951 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.08■□□□□ 0.48
LdlrP35951 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
LdlrP35951 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LdlrP35951 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.08■□□□□ 0.48
LdlrP35951 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LdlrP35951 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LdlrP35951 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LdlrP35951 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LdlrP35951 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms