Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.95■□□□□ 0.78
Sox5P35710 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox5P35710 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox5P35710 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Sox5P35710 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox5P35710 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sox5P35710 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.94■□□□□ 0.78
Sox5P35710 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox5P35710 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox5P35710 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox5P35710 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox5P35710 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Sox5P35710 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox5P35710 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox5P35710 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox5P35710 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox5P35710 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox5P35710 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox5P35710 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sox5P35710 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.93■□□□□ 0.78
Sox5P35710 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sox5P35710 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Sox5P35710 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Sox5P35710 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sox5P35710 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sox5P35710 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Sox5P35710 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.93■□□□□ 0.78
Sox5P35710 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox5P35710 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox5P35710 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox5P35710 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox5P35710 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sox5P35710 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sox5P35710 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox5P35710 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox5P35710 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sox5P35710 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox5P35710 Gm13534-201ENSMUST00000121169 513 ntBASIC19.92■□□□□ 0.78
Sox5P35710 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sox5P35710 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox5P35710 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sox5P35710 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sox5P35710 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox5P35710 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Sox5P35710 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Sox5P35710 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Sox5P35710 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox5P35710 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Sox5P35710 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox5P35710 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.91■□□□□ 0.78
Sox5P35710 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox5P35710 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Sox5P35710 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.91■□□□□ 0.78
Sox5P35710 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox5P35710 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Sox5P35710 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox5P35710 Reep4-203ENSMUST00000226563 1444 ntBASIC19.91■□□□□ 0.78
Sox5P35710 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.91■□□□□ 0.78
Sox5P35710 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox5P35710 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Sox5P35710 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Sox5P35710 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox5P35710 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Sox5P35710 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox5P35710 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox5P35710 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sox5P35710 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Sox5P35710 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.9■□□□□ 0.78
Sox5P35710 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox5P35710 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Sox5P35710 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox5P35710 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox5P35710 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Sox5P35710 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
Sox5P35710 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox5P35710 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sox5P35710 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sox5P35710 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.89■□□□□ 0.77
Sox5P35710 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Sox5P35710 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.89■□□□□ 0.77
Sox5P35710 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.89■□□□□ 0.77
Sox5P35710 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox5P35710 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox5P35710 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.89■□□□□ 0.77
Sox5P35710 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Sox5P35710 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox5P35710 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sox5P35710 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox5P35710 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.89■□□□□ 0.77
Sox5P35710 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox5P35710 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox5P35710 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.88■□□□□ 0.77
Sox5P35710 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.88■□□□□ 0.77
Sox5P35710 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.88■□□□□ 0.77
Sox5P35710 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Sox5P35710 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox5P35710 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Sox5P35710 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Sox5P35710 Gm9988-201ENSMUST00000069786 435 ntBASIC19.88■□□□□ 0.77
Sox5P35710 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms