Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp13P33435 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Mmp13P33435 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp13P33435 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp13P33435 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp13P33435 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Mmp13P33435 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp13P33435 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.66■□□□□ 0.58
Mmp13P33435 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Mmp13P33435 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Mmp13P33435 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 Gm10849-201ENSMUST00000100397 618 ntBASIC18.66■□□□□ 0.58
Mmp13P33435 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Mmp13P33435 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.66■□□□□ 0.58
Mmp13P33435 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Mmp13P33435 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp13P33435 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp13P33435 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp13P33435 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp13P33435 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp13P33435 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Mmp13P33435 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.65■□□□□ 0.58
Mmp13P33435 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp13P33435 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.65■□□□□ 0.58
Mmp13P33435 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp13P33435 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp13P33435 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp13P33435 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp13P33435 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp13P33435 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp13P33435 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.65■□□□□ 0.58
Mmp13P33435 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp13P33435 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Mmp13P33435 Gm38205-201ENSMUST00000192243 258 ntBASIC18.64■□□□□ 0.57
Mmp13P33435 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp13P33435 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.64■□□□□ 0.57
Mmp13P33435 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Mmp13P33435 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp13P33435 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp13P33435 Fst-202ENSMUST00000223640 2612 ntBASIC18.64■□□□□ 0.57
Mmp13P33435 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Mmp13P33435 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.64■□□□□ 0.57
Mmp13P33435 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Mmp13P33435 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp13P33435 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp13P33435 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp13P33435 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.63■□□□□ 0.57
Mmp13P33435 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp13P33435 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp13P33435 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Mmp13P33435 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp13P33435 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.63■□□□□ 0.57
Mmp13P33435 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp13P33435 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp13P33435 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp13P33435 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp13P33435 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Mmp13P33435 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Mmp13P33435 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp13P33435 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Mmp13P33435 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp13P33435 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp13P33435 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
Mmp13P33435 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp13P33435 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp13P33435 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp13P33435 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.62■□□□□ 0.57
Mmp13P33435 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp13P33435 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp13P33435 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Mmp13P33435 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp13P33435 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp13P33435 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Mmp13P33435 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp13P33435 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Mmp13P33435 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Mmp13P33435 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.61■□□□□ 0.57
Mmp13P33435 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp13P33435 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp13P33435 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Mmp13P33435 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp13P33435 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Mmp13P33435 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.61■□□□□ 0.57
Mmp13P33435 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms