Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Mmp3P28862 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp3P28862 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp3P28862 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.6■□□□□ 0.73
Mmp3P28862 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp3P28862 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp3P28862 Notumos-201ENSMUST00000151998 2659 ntBASIC19.59■□□□□ 0.73
Mmp3P28862 BC021767-201ENSMUST00000126387 1716 ntBASIC19.59■□□□□ 0.73
Mmp3P28862 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp3P28862 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp3P28862 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp3P28862 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp3P28862 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp3P28862 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.59■□□□□ 0.73
Mmp3P28862 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp3P28862 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp3P28862 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp3P28862 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp3P28862 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp3P28862 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.58■□□□□ 0.73
Mmp3P28862 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mmp3P28862 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.58■□□□□ 0.72
Mmp3P28862 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.58■□□□□ 0.72
Mmp3P28862 Gm18025-201ENSMUST00000221733 862 ntBASIC19.58■□□□□ 0.72
Mmp3P28862 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.58■□□□□ 0.72
Mmp3P28862 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mmp3P28862 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mmp3P28862 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mmp3P28862 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mmp3P28862 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.58■□□□□ 0.72
Mmp3P28862 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mmp3P28862 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mmp3P28862 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp3P28862 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Mmp3P28862 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp3P28862 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Mmp3P28862 Gm43183-201ENSMUST00000200632 547 ntBASIC19.57■□□□□ 0.72
Mmp3P28862 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp3P28862 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp3P28862 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp3P28862 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.57■□□□□ 0.72
Mmp3P28862 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp3P28862 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp3P28862 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Mmp3P28862 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Mmp3P28862 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Mmp3P28862 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp3P28862 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp3P28862 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp3P28862 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.56■□□□□ 0.72
Mmp3P28862 Gm42545-201ENSMUST00000202755 922 ntBASIC19.56■□□□□ 0.72
Mmp3P28862 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp3P28862 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.56■□□□□ 0.72
Mmp3P28862 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.56■□□□□ 0.72
Mmp3P28862 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Mmp3P28862 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp3P28862 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.56■□□□□ 0.72
Mmp3P28862 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp3P28862 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp3P28862 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp3P28862 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp3P28862 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Mmp3P28862 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.55■□□□□ 0.72
Mmp3P28862 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp3P28862 Mir5122-201ENSMUST00000175004 89 ntBASIC19.55■□□□□ 0.72
Mmp3P28862 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.55■□□□□ 0.72
Mmp3P28862 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.55■□□□□ 0.72
Mmp3P28862 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp3P28862 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp3P28862 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp3P28862 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp3P28862 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Mmp3P28862 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp3P28862 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp3P28862 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.54■□□□□ 0.72
Mmp3P28862 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp3P28862 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.54■□□□□ 0.72
Mmp3P28862 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.54■□□□□ 0.72
Mmp3P28862 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp3P28862 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp3P28862 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Mmp3P28862 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp3P28862 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp3P28862 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp3P28862 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp3P28862 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp3P28862 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp3P28862 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp3P28862 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp3P28862 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Mmp3P28862 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp3P28862 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp3P28862 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp3P28862 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp3P28862 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.53■□□□□ 0.72
Mmp3P28862 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Mmp3P28862 Gm15565-201ENSMUST00000118890 427 ntBASIC19.53■□□□□ 0.72
Mmp3P28862 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Mmp3P28862 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.53■□□□□ 0.72
Mmp3P28862 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms