Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nfkb1P25799 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nfkb1P25799 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nfkb1P25799 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nfkb1P25799 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nfkb1P25799 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nfkb1P25799 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.73■□□□□ 0.59
Nfkb1P25799 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nfkb1P25799 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nfkb1P25799 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Nfkb1P25799 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.73■□□□□ 0.59
Nfkb1P25799 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nfkb1P25799 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nfkb1P25799 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nfkb1P25799 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nfkb1P25799 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nfkb1P25799 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nfkb1P25799 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nfkb1P25799 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nfkb1P25799 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.72■□□□□ 0.59
Nfkb1P25799 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nfkb1P25799 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.72■□□□□ 0.59
Nfkb1P25799 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.72■□□□□ 0.59
Nfkb1P25799 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nfkb1P25799 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.72■□□□□ 0.59
Nfkb1P25799 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.72■□□□□ 0.59
Nfkb1P25799 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nfkb1P25799 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Nfkb1P25799 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nfkb1P25799 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nfkb1P25799 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nfkb1P25799 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nfkb1P25799 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nfkb1P25799 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nfkb1P25799 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.71■□□□□ 0.59
Nfkb1P25799 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nfkb1P25799 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nfkb1P25799 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Nfkb1P25799 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.71■□□□□ 0.59
Nfkb1P25799 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.71■□□□□ 0.59
Nfkb1P25799 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.71■□□□□ 0.59
Nfkb1P25799 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nfkb1P25799 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nfkb1P25799 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Nfkb1P25799 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nfkb1P25799 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nfkb1P25799 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nfkb1P25799 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nfkb1P25799 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nfkb1P25799 Gm15378-201ENSMUST00000121894 207 ntBASIC18.7■□□□□ 0.58
Nfkb1P25799 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Nfkb1P25799 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nfkb1P25799 Mir6982-201ENSMUST00000184354 68 ntBASIC18.7■□□□□ 0.58
Nfkb1P25799 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nfkb1P25799 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nfkb1P25799 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nfkb1P25799 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nfkb1P25799 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nfkb1P25799 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Nfkb1P25799 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nfkb1P25799 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nfkb1P25799 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nfkb1P25799 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nfkb1P25799 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nfkb1P25799 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nfkb1P25799 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nfkb1P25799 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Nfkb1P25799 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Nfkb1P25799 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
Nfkb1P25799 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nfkb1P25799 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nfkb1P25799 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.69■□□□□ 0.58
Nfkb1P25799 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Nfkb1P25799 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nfkb1P25799 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.69■□□□□ 0.58
Nfkb1P25799 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nfkb1P25799 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.69■□□□□ 0.58
Nfkb1P25799 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.69■□□□□ 0.58
Nfkb1P25799 Mtag2-201ENSMUST00000058665 714 ntBASIC18.69■□□□□ 0.58
Nfkb1P25799 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nfkb1P25799 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.69■□□□□ 0.58
Nfkb1P25799 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nfkb1P25799 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nfkb1P25799 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nfkb1P25799 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nfkb1P25799 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nfkb1P25799 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nfkb1P25799 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nfkb1P25799 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nfkb1P25799 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nfkb1P25799 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nfkb1P25799 Gm6576-201ENSMUST00000169678 883 ntBASIC18.68■□□□□ 0.58
Nfkb1P25799 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.68■□□□□ 0.58
Nfkb1P25799 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.68■□□□□ 0.58
Nfkb1P25799 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.68■□□□□ 0.58
Nfkb1P25799 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nfkb1P25799 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nfkb1P25799 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.68■□□□□ 0.58
Nfkb1P25799 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nfkb1P25799 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms