Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Aldh1a1P24549 Gm10517-202ENSMUST00000192970 758 ntBASIC19.64■□□□□ 0.73
Aldh1a1P24549 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Aldh1a1P24549 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Aldh1a1P24549 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Aldh1a1P24549 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.64■□□□□ 0.73
Aldh1a1P24549 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Aldh1a1P24549 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Aldh1a1P24549 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.63■□□□□ 0.73
Aldh1a1P24549 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Aldh1a1P24549 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Aldh1a1P24549 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Aldh1a1P24549 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.63■□□□□ 0.73
Aldh1a1P24549 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Aldh1a1P24549 Gm45058-201ENSMUST00000205810 766 ntBASIC19.63■□□□□ 0.73
Aldh1a1P24549 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Aldh1a1P24549 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Aldh1a1P24549 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Aldh1a1P24549 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Aldh1a1P24549 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Aldh1a1P24549 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Aldh1a1P24549 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Aldh1a1P24549 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.62■□□□□ 0.73
Aldh1a1P24549 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Aldh1a1P24549 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.62■□□□□ 0.73
Aldh1a1P24549 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Aldh1a1P24549 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Aldh1a1P24549 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.62■□□□□ 0.73
Aldh1a1P24549 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Aldh1a1P24549 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Aldh1a1P24549 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Aldh1a1P24549 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Aldh1a1P24549 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Aldh1a1P24549 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Aldh1a1P24549 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Aldh1a1P24549 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Aldh1a1P24549 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Aldh1a1P24549 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Aldh1a1P24549 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Aldh1a1P24549 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Aldh1a1P24549 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Aldh1a1P24549 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Aldh1a1P24549 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Aldh1a1P24549 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Aldh1a1P24549 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.61■□□□□ 0.73
Aldh1a1P24549 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Aldh1a1P24549 Gm33142-201ENSMUST00000193913 867 ntBASIC19.61■□□□□ 0.73
Aldh1a1P24549 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Aldh1a1P24549 Gm18032-201ENSMUST00000222541 538 ntBASIC19.61■□□□□ 0.73
Aldh1a1P24549 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Aldh1a1P24549 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.6■□□□□ 0.73
Aldh1a1P24549 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Aldh1a1P24549 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Aldh1a1P24549 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Aldh1a1P24549 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Aldh1a1P24549 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Aldh1a1P24549 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.59■□□□□ 0.73
Aldh1a1P24549 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.59■□□□□ 0.73
Aldh1a1P24549 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Aldh1a1P24549 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Aldh1a1P24549 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Aldh1a1P24549 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Aldh1a1P24549 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Aldh1a1P24549 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Aldh1a1P24549 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Aldh1a1P24549 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Aldh1a1P24549 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.58■□□□□ 0.73
Aldh1a1P24549 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Aldh1a1P24549 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Aldh1a1P24549 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Aldh1a1P24549 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Aldh1a1P24549 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Aldh1a1P24549 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Aldh1a1P24549 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Aldh1a1P24549 Gm6345-202ENSMUST00000180900 204 ntBASIC19.58■□□□□ 0.72
Aldh1a1P24549 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.58■□□□□ 0.72
Aldh1a1P24549 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Aldh1a1P24549 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Aldh1a1P24549 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Aldh1a1P24549 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Aldh1a1P24549 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Aldh1a1P24549 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Aldh1a1P24549 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Aldh1a1P24549 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Aldh1a1P24549 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Aldh1a1P24549 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.57■□□□□ 0.72
Aldh1a1P24549 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Aldh1a1P24549 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Aldh1a1P24549 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Aldh1a1P24549 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Aldh1a1P24549 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Aldh1a1P24549 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Aldh1a1P24549 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Aldh1a1P24549 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.56■□□□□ 0.72
Aldh1a1P24549 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Aldh1a1P24549 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Aldh1a1P24549 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Aldh1a1P24549 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Aldh1a1P24549 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.56■□□□□ 0.72
Aldh1a1P24549 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms