Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.97■□□□□ 0.63
Hoxd8P23463 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.97■□□□□ 0.63
Hoxd8P23463 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Hoxd8P23463 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxd8P23463 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Hoxd8P23463 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxd8P23463 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Hoxd8P23463 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Hoxd8P23463 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.96■□□□□ 0.63
Hoxd8P23463 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.96■□□□□ 0.63
Hoxd8P23463 Timm23-208ENSMUST00000226683 750 ntBASIC18.96■□□□□ 0.63
Hoxd8P23463 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Hoxd8P23463 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Hoxd8P23463 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxd8P23463 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxd8P23463 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Hoxd8P23463 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Hoxd8P23463 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxd8P23463 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxd8P23463 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxd8P23463 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxd8P23463 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.95■□□□□ 0.62
Hoxd8P23463 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxd8P23463 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Hoxd8P23463 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxd8P23463 Gm3375-201ENSMUST00000203929 796 ntBASIC18.95■□□□□ 0.62
Hoxd8P23463 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.95■□□□□ 0.62
Hoxd8P23463 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxd8P23463 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxd8P23463 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.95■□□□□ 0.62
Hoxd8P23463 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxd8P23463 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxd8P23463 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxd8P23463 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Hoxd8P23463 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Hoxd8P23463 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxd8P23463 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxd8P23463 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxd8P23463 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxd8P23463 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxd8P23463 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxd8P23463 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxd8P23463 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxd8P23463 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxd8P23463 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Hoxd8P23463 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxd8P23463 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxd8P23463 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxd8P23463 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxd8P23463 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxd8P23463 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxd8P23463 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxd8P23463 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxd8P23463 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxd8P23463 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxd8P23463 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.93■□□□□ 0.62
Hoxd8P23463 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxd8P23463 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.93■□□□□ 0.62
Hoxd8P23463 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxd8P23463 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxd8P23463 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxd8P23463 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.93■□□□□ 0.62
Hoxd8P23463 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxd8P23463 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Hoxd8P23463 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxd8P23463 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Hoxd8P23463 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxd8P23463 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxd8P23463 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxd8P23463 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.92■□□□□ 0.62
Hoxd8P23463 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxd8P23463 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxd8P23463 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Hoxd8P23463 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxd8P23463 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.91■□□□□ 0.62
Hoxd8P23463 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxd8P23463 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxd8P23463 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.91■□□□□ 0.62
Hoxd8P23463 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxd8P23463 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.91■□□□□ 0.62
Hoxd8P23463 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxd8P23463 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.91■□□□□ 0.62
Hoxd8P23463 Gm30025-201ENSMUST00000218555 728 ntBASIC18.91■□□□□ 0.62
Hoxd8P23463 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.91■□□□□ 0.62
Hoxd8P23463 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxd8P23463 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Hoxd8P23463 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxd8P23463 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.91■□□□□ 0.62
Hoxd8P23463 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxd8P23463 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxd8P23463 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxd8P23463 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Hoxd8P23463 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxd8P23463 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Hoxd8P23463 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Hoxd8P23463 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.9■□□□□ 0.62
Hoxd8P23463 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxd8P23463 Gm10231-201ENSMUST00000181584 441 ntBASIC18.9■□□□□ 0.62
Hoxd8P23463 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxd8P23463 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms