Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Cntn1P12960 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cntn1P12960 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cntn1P12960 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.49■□□□□ 0.39
Cntn1P12960 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.49■□□□□ 0.39
Cntn1P12960 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cntn1P12960 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cntn1P12960 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cntn1P12960 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cntn1P12960 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cntn1P12960 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cntn1P12960 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cntn1P12960 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cntn1P12960 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cntn1P12960 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cntn1P12960 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cntn1P12960 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cntn1P12960 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cntn1P12960 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cntn1P12960 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cntn1P12960 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cntn1P12960 Gm11249-201ENSMUST00000117071 859 ntBASIC17.48■□□□□ 0.39
Cntn1P12960 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.48■□□□□ 0.39
Cntn1P12960 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cntn1P12960 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cntn1P12960 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cntn1P12960 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cntn1P12960 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Cntn1P12960 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cntn1P12960 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cntn1P12960 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cntn1P12960 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cntn1P12960 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cntn1P12960 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cntn1P12960 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.48■□□□□ 0.39
Cntn1P12960 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cntn1P12960 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cntn1P12960 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cntn1P12960 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cntn1P12960 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.47■□□□□ 0.39
Cntn1P12960 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Cntn1P12960 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cntn1P12960 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cntn1P12960 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.47■□□□□ 0.39
Cntn1P12960 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cntn1P12960 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cntn1P12960 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cntn1P12960 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cntn1P12960 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cntn1P12960 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cntn1P12960 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cntn1P12960 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cntn1P12960 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cntn1P12960 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cntn1P12960 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cntn1P12960 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.46■□□□□ 0.39
Cntn1P12960 Gm22325-201ENSMUST00000158904 308 ntBASIC17.46■□□□□ 0.39
Cntn1P12960 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cntn1P12960 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cntn1P12960 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cntn1P12960 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cntn1P12960 BC021767-201ENSMUST00000126387 1716 ntBASIC17.46■□□□□ 0.39
Cntn1P12960 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cntn1P12960 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.46■□□□□ 0.38
Cntn1P12960 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cntn1P12960 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cntn1P12960 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cntn1P12960 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cntn1P12960 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cntn1P12960 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cntn1P12960 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cntn1P12960 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cntn1P12960 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cntn1P12960 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cntn1P12960 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cntn1P12960 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cntn1P12960 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cntn1P12960 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cntn1P12960 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cntn1P12960 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cntn1P12960 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.44■□□□□ 0.38
Cntn1P12960 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cntn1P12960 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cntn1P12960 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cntn1P12960 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.44■□□□□ 0.38
Cntn1P12960 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.44■□□□□ 0.38
Cntn1P12960 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.44■□□□□ 0.38
Cntn1P12960 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.44■□□□□ 0.38
Cntn1P12960 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cntn1P12960 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cntn1P12960 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cntn1P12960 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cntn1P12960 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cntn1P12960 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cntn1P12960 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cntn1P12960 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.44■□□□□ 0.38
Cntn1P12960 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cntn1P12960 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cntn1P12960 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.43■□□□□ 0.38
Cntn1P12960 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms