Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04224 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04224 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04224 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04224 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04224 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
P04224 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04224 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.02■□□□□ 0.16
P04224 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04224 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
P04224 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.02■□□□□ 0.16
P04224 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
P04224 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04224 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
P04224 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
P04224 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
P04224 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
P04224 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
P04224 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
P04224 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
P04224 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04224 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04224 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04224 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
P04224 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.01■□□□□ 0.15
P04224 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
P04224 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04224 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04224 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04224 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
P04224 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.01■□□□□ 0.15
P04224 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
P04224 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04224 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04224 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04224 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04224 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.01■□□□□ 0.15
P04224 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04224 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04224 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
P04224 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16■□□□□ 0.15
P04224 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
P04224 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
P04224 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
P04224 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
P04224 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
P04224 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16■□□□□ 0.15
P04224 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16■□□□□ 0.15
P04224 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16■□□□□ 0.15
P04224 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16■□□□□ 0.15
P04224 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
P04224 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
P04224 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
P04224 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
P04224 Gm10571-201ENSMUST00000097869 1638 ntBASIC16■□□□□ 0.15
P04224 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
P04224 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16■□□□□ 0.15
P04224 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
P04224 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
P04224 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04224 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04224 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04224 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
P04224 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.99■□□□□ 0.15
P04224 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.99■□□□□ 0.15
P04224 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.99■□□□□ 0.15
P04224 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04224 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
P04224 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
P04224 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04224 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
P04224 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
P04224 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
P04224 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.98■□□□□ 0.15
P04224 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.98■□□□□ 0.15
P04224 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.98■□□□□ 0.15
P04224 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.98■□□□□ 0.15
P04224 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
P04224 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
P04224 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
P04224 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
P04224 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
P04224 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
P04224 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.97■□□□□ 0.15
P04224 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
P04224 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
P04224 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.97■□□□□ 0.15
P04224 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
P04224 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
P04224 Gm14117-201ENSMUST00000122417 843 ntBASIC15.97■□□□□ 0.15
P04224 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.97■□□□□ 0.15
P04224 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
P04224 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
P04224 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.97■□□□□ 0.15
P04224 Rps24-207ENSMUST00000224568 714 ntBASIC15.97■□□□□ 0.15
P04224 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
P04224 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
P04224 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
P04224 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
P04224 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms