Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxa3P02831 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa3P02831 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Hoxa3P02831 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa3P02831 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa3P02831 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa3P02831 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
Hoxa3P02831 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa3P02831 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa3P02831 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa3P02831 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa3P02831 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa3P02831 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa3P02831 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa3P02831 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.27■□□□□ 0.04
Hoxa3P02831 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa3P02831 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.27■□□□□ 0.04
Hoxa3P02831 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.27■□□□□ 0.04
Hoxa3P02831 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa3P02831 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Hoxa3P02831 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Hoxa3P02831 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.27■□□□□ 0.03
Hoxa3P02831 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxa3P02831 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxa3P02831 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxa3P02831 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxa3P02831 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.27■□□□□ 0.03
Hoxa3P02831 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
Hoxa3P02831 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa3P02831 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa3P02831 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa3P02831 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa3P02831 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa3P02831 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa3P02831 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Hoxa3P02831 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
Hoxa3P02831 Gm12896-201ENSMUST00000118430 226 ntBASIC15.26■□□□□ 0.03
Hoxa3P02831 Gm13168-201ENSMUST00000121771 632 ntBASIC15.26■□□□□ 0.03
Hoxa3P02831 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.26■□□□□ 0.03
Hoxa3P02831 Gm8520-201ENSMUST00000186517 868 ntBASIC15.26■□□□□ 0.03
Hoxa3P02831 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa3P02831 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa3P02831 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa3P02831 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa3P02831 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa3P02831 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa3P02831 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.26■□□□□ 0.03
Hoxa3P02831 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa3P02831 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa3P02831 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa3P02831 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa3P02831 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa3P02831 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa3P02831 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa3P02831 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.25■□□□□ 0.03
Hoxa3P02831 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.25■□□□□ 0.03
Hoxa3P02831 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.25■□□□□ 0.03
Hoxa3P02831 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Hoxa3P02831 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Hoxa3P02831 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Hoxa3P02831 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa3P02831 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa3P02831 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.25■□□□□ 0.03
Hoxa3P02831 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Hoxa3P02831 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa3P02831 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa3P02831 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxa3P02831 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxa3P02831 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hoxa3P02831 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxa3P02831 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxa3P02831 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxa3P02831 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxa3P02831 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hoxa3P02831 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.24■□□□□ 0.03
Hoxa3P02831 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxa3P02831 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hoxa3P02831 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxa3P02831 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hoxa3P02831 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hoxa3P02831 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxa3P02831 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hoxa3P02831 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxa3P02831 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxa3P02831 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxa3P02831 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Hoxa3P02831 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.23■□□□□ 0.03
Hoxa3P02831 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.23■□□□□ 0.03
Hoxa3P02831 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxa3P02831 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxa3P02831 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxa3P02831 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxa3P02831 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.23■□□□□ 0.03
Hoxa3P02831 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxa3P02831 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Hoxa3P02831 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxa3P02831 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxa3P02831 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxa3P02831 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxa3P02831 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms