Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.5■□□□□ 0.55
Sp1O89090 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Sp1O89090 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.5■□□□□ 0.55
Sp1O89090 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sp1O89090 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Sp1O89090 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Sp1O89090 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sp1O89090 Golph3-205ENSMUST00000228671 2842 ntBASIC18.5■□□□□ 0.55
Sp1O89090 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sp1O89090 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sp1O89090 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sp1O89090 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.5■□□□□ 0.55
Sp1O89090 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp1O89090 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.49■□□□□ 0.55
Sp1O89090 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.49■□□□□ 0.55
Sp1O89090 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp1O89090 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp1O89090 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.49■□□□□ 0.55
Sp1O89090 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp1O89090 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp1O89090 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sp1O89090 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp1O89090 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp1O89090 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp1O89090 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp1O89090 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sp1O89090 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sp1O89090 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sp1O89090 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.48■□□□□ 0.55
Sp1O89090 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sp1O89090 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.48■□□□□ 0.55
Sp1O89090 Gm10252-201ENSMUST00000209541 832 ntBASIC18.48■□□□□ 0.55
Sp1O89090 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sp1O89090 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sp1O89090 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sp1O89090 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sp1O89090 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sp1O89090 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sp1O89090 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Sp1O89090 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Sp1O89090 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Sp1O89090 Gm15378-201ENSMUST00000121894 207 ntBASIC18.47■□□□□ 0.55
Sp1O89090 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.47■□□□□ 0.55
Sp1O89090 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.47■□□□□ 0.55
Sp1O89090 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sp1O89090 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sp1O89090 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sp1O89090 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sp1O89090 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sp1O89090 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.47■□□□□ 0.55
Sp1O89090 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sp1O89090 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.47■□□□□ 0.55
Sp1O89090 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sp1O89090 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.47■□□□□ 0.55
Sp1O89090 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sp1O89090 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.46■□□□□ 0.55
Sp1O89090 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.46■□□□□ 0.55
Sp1O89090 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sp1O89090 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sp1O89090 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Sp1O89090 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sp1O89090 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sp1O89090 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sp1O89090 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sp1O89090 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Sp1O89090 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Sp1O89090 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Sp1O89090 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Sp1O89090 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.45■□□□□ 0.54
Sp1O89090 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sp1O89090 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sp1O89090 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sp1O89090 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Sp1O89090 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sp1O89090 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sp1O89090 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.45■□□□□ 0.54
Sp1O89090 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sp1O89090 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sp1O89090 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sp1O89090 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sp1O89090 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sp1O89090 Gm10138-203ENSMUST00000206952 366 ntBASIC18.44■□□□□ 0.54
Sp1O89090 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sp1O89090 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sp1O89090 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Sp1O89090 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sp1O89090 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sp1O89090 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sp1O89090 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.43■□□□□ 0.54
Sp1O89090 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sp1O89090 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sp1O89090 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sp1O89090 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sp1O89090 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sp1O89090 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.43■□□□□ 0.54
Sp1O89090 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sp1O89090 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Sp1O89090 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sp1O89090 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sp1O89090 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms