Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CopeO89079 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.86■□□□□ 0.61
CopeO89079 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.86■□□□□ 0.61
CopeO89079 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.86■□□□□ 0.61
CopeO89079 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CopeO89079 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CopeO89079 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CopeO89079 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CopeO89079 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CopeO89079 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
CopeO89079 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.86■□□□□ 0.61
CopeO89079 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CopeO89079 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CopeO89079 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CopeO89079 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CopeO89079 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CopeO89079 Fst-202ENSMUST00000223640 2612 ntBASIC18.85■□□□□ 0.61
CopeO89079 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CopeO89079 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CopeO89079 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CopeO89079 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.85■□□□□ 0.61
CopeO89079 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CopeO89079 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CopeO89079 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CopeO89079 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CopeO89079 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CopeO89079 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CopeO89079 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CopeO89079 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.84■□□□□ 0.61
CopeO89079 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CopeO89079 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CopeO89079 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CopeO89079 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CopeO89079 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CopeO89079 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CopeO89079 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CopeO89079 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.84■□□□□ 0.61
CopeO89079 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CopeO89079 Gm38205-201ENSMUST00000192243 258 ntBASIC18.84■□□□□ 0.61
CopeO89079 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CopeO89079 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CopeO89079 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CopeO89079 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CopeO89079 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CopeO89079 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CopeO89079 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CopeO89079 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CopeO89079 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CopeO89079 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CopeO89079 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
CopeO89079 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CopeO89079 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.83■□□□□ 0.6
CopeO89079 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CopeO89079 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CopeO89079 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CopeO89079 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.83■□□□□ 0.6
CopeO89079 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CopeO89079 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.83■□□□□ 0.6
CopeO89079 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CopeO89079 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CopeO89079 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CopeO89079 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CopeO89079 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopeO89079 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopeO89079 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopeO89079 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopeO89079 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CopeO89079 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopeO89079 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopeO89079 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.82■□□□□ 0.6
CopeO89079 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CopeO89079 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopeO89079 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopeO89079 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopeO89079 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopeO89079 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopeO89079 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.82■□□□□ 0.6
CopeO89079 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopeO89079 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopeO89079 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CopeO89079 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CopeO89079 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CopeO89079 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CopeO89079 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CopeO89079 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.81■□□□□ 0.6
CopeO89079 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CopeO89079 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CopeO89079 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
CopeO89079 Gm40848-201ENSMUST00000221998 324 ntBASIC18.81■□□□□ 0.6
CopeO89079 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CopeO89079 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.81■□□□□ 0.6
CopeO89079 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CopeO89079 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CopeO89079 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CopeO89079 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CopeO89079 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CopeO89079 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CopeO89079 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CopeO89079 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CopeO89079 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms