Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Abcd4O89016 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Abcd4O89016 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Abcd4O89016 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Abcd4O89016 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.48■□□□□ 0.23
Abcd4O89016 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcd4O89016 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcd4O89016 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.48■□□□□ 0.23
Abcd4O89016 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcd4O89016 Gm37856-201ENSMUST00000191634 999 ntBASIC16.48■□□□□ 0.23
Abcd4O89016 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.48■□□□□ 0.23
Abcd4O89016 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.48■□□□□ 0.23
Abcd4O89016 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcd4O89016 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcd4O89016 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcd4O89016 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcd4O89016 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcd4O89016 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcd4O89016 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Abcd4O89016 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Abcd4O89016 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Abcd4O89016 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Abcd4O89016 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcd4O89016 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcd4O89016 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcd4O89016 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcd4O89016 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcd4O89016 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcd4O89016 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcd4O89016 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Abcd4O89016 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Abcd4O89016 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Abcd4O89016 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcd4O89016 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Abcd4O89016 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcd4O89016 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Abcd4O89016 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Abcd4O89016 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.47■□□□□ 0.23
Abcd4O89016 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Abcd4O89016 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Abcd4O89016 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcd4O89016 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcd4O89016 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Abcd4O89016 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Abcd4O89016 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Abcd4O89016 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.47■□□□□ 0.23
Abcd4O89016 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcd4O89016 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcd4O89016 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcd4O89016 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcd4O89016 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.46■□□□□ 0.23
Abcd4O89016 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Abcd4O89016 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Abcd4O89016 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcd4O89016 Gm10812-201ENSMUST00000099864 546 ntBASIC16.46■□□□□ 0.23
Abcd4O89016 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcd4O89016 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Abcd4O89016 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.46■□□□□ 0.23
Abcd4O89016 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Abcd4O89016 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Abcd4O89016 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcd4O89016 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcd4O89016 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcd4O89016 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.45■□□□□ 0.22
Abcd4O89016 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.45■□□□□ 0.22
Abcd4O89016 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.45■□□□□ 0.22
Abcd4O89016 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Abcd4O89016 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.45■□□□□ 0.22
Abcd4O89016 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.45■□□□□ 0.22
Abcd4O89016 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.45■□□□□ 0.22
Abcd4O89016 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.45■□□□□ 0.22
Abcd4O89016 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Abcd4O89016 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcd4O89016 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcd4O89016 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Abcd4O89016 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcd4O89016 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcd4O89016 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.45■□□□□ 0.22
Abcd4O89016 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcd4O89016 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abcd4O89016 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Abcd4O89016 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcd4O89016 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Abcd4O89016 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Abcd4O89016 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcd4O89016 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcd4O89016 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.44■□□□□ 0.22
Abcd4O89016 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.44■□□□□ 0.22
Abcd4O89016 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.44■□□□□ 0.22
Abcd4O89016 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.44■□□□□ 0.22
Abcd4O89016 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.44■□□□□ 0.22
Abcd4O89016 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.44■□□□□ 0.22
Abcd4O89016 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Abcd4O89016 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcd4O89016 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.44■□□□□ 0.22
Abcd4O89016 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcd4O89016 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Abcd4O89016 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.44■□□□□ 0.22
Abcd4O89016 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abcd4O89016 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms