Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Best1O88870 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Best1O88870 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Best1O88870 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Best1O88870 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.58■□□□□ 0.4
Best1O88870 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Best1O88870 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.58■□□□□ 0.4
Best1O88870 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Best1O88870 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Best1O88870 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Best1O88870 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Best1O88870 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Best1O88870 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Best1O88870 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Best1O88870 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Best1O88870 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Best1O88870 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Best1O88870 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Best1O88870 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.57■□□□□ 0.4
Best1O88870 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Best1O88870 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.57■□□□□ 0.4
Best1O88870 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Best1O88870 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Best1O88870 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Best1O88870 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Best1O88870 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Best1O88870 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Best1O88870 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Best1O88870 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.56■□□□□ 0.4
Best1O88870 Gm6576-201ENSMUST00000169678 883 ntBASIC17.56■□□□□ 0.4
Best1O88870 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.56■□□□□ 0.4
Best1O88870 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.56■□□□□ 0.4
Best1O88870 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.56■□□□□ 0.4
Best1O88870 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Best1O88870 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Best1O88870 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Best1O88870 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Best1O88870 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Best1O88870 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
Best1O88870 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.56■□□□□ 0.4
Best1O88870 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Best1O88870 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Best1O88870 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Best1O88870 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Best1O88870 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Best1O88870 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.55■□□□□ 0.4
Best1O88870 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Best1O88870 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Best1O88870 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Best1O88870 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Best1O88870 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Best1O88870 Gm10252-201ENSMUST00000209541 832 ntBASIC17.55■□□□□ 0.4
Best1O88870 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Best1O88870 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Best1O88870 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Best1O88870 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Best1O88870 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Best1O88870 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Best1O88870 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Best1O88870 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Best1O88870 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Best1O88870 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Best1O88870 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.54■□□□□ 0.4
Best1O88870 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Best1O88870 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.54■□□□□ 0.4
Best1O88870 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Best1O88870 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Best1O88870 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Best1O88870 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.54■□□□□ 0.4
Best1O88870 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Best1O88870 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Best1O88870 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Best1O88870 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Best1O88870 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.54■□□□□ 0.4
Best1O88870 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Best1O88870 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.53■□□□□ 0.4
Best1O88870 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Best1O88870 Mir1199-201ENSMUST00000117015 119 ntBASIC17.53■□□□□ 0.4
Best1O88870 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Best1O88870 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.53■□□□□ 0.4
Best1O88870 Gm18025-201ENSMUST00000221733 862 ntBASIC17.53■□□□□ 0.4
Best1O88870 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Best1O88870 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Best1O88870 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Best1O88870 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Best1O88870 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Best1O88870 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Best1O88870 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Best1O88870 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Best1O88870 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Best1O88870 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Best1O88870 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Best1O88870 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.52■□□□□ 0.4
Best1O88870 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Best1O88870 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Best1O88870 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.52■□□□□ 0.4
Best1O88870 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Best1O88870 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Best1O88870 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Best1O88870 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms