Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClppO88696 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.75■□□□□ 0.43
ClppO88696 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClppO88696 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClppO88696 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.75■□□□□ 0.43
ClppO88696 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClppO88696 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ClppO88696 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClppO88696 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClppO88696 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.74■□□□□ 0.43
ClppO88696 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClppO88696 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ClppO88696 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.74■□□□□ 0.43
ClppO88696 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.74■□□□□ 0.43
ClppO88696 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClppO88696 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.74■□□□□ 0.43
ClppO88696 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClppO88696 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClppO88696 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ClppO88696 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClppO88696 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ClppO88696 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClppO88696 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ClppO88696 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ClppO88696 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClppO88696 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClppO88696 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ClppO88696 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClppO88696 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ClppO88696 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClppO88696 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ClppO88696 Trmt13-210ENSMUST00000198454 880 ntBASIC17.73■□□□□ 0.43
ClppO88696 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClppO88696 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClppO88696 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.73■□□□□ 0.43
ClppO88696 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClppO88696 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClppO88696 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ClppO88696 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.72■□□□□ 0.43
ClppO88696 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
ClppO88696 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ClppO88696 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ClppO88696 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.72■□□□□ 0.43
ClppO88696 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.72■□□□□ 0.43
ClppO88696 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ClppO88696 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ClppO88696 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ClppO88696 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ClppO88696 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ClppO88696 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.71■□□□□ 0.43
ClppO88696 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ClppO88696 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ClppO88696 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClppO88696 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.71■□□□□ 0.43
ClppO88696 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClppO88696 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClppO88696 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClppO88696 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.71■□□□□ 0.43
ClppO88696 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ClppO88696 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClppO88696 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClppO88696 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ClppO88696 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ClppO88696 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClppO88696 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClppO88696 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ClppO88696 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClppO88696 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClppO88696 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClppO88696 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ClppO88696 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ClppO88696 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ClppO88696 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.7■□□□□ 0.42
ClppO88696 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.7■□□□□ 0.42
ClppO88696 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClppO88696 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ClppO88696 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClppO88696 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClppO88696 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClppO88696 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClppO88696 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClppO88696 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClppO88696 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClppO88696 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClppO88696 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClppO88696 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ClppO88696 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ClppO88696 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.69■□□□□ 0.42
ClppO88696 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClppO88696 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.69■□□□□ 0.42
ClppO88696 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClppO88696 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ClppO88696 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClppO88696 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClppO88696 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ClppO88696 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ClppO88696 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClppO88696 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ClppO88696 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClppO88696 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms