Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldn1O88551 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.63■□□□□ 0.09
Cldn1O88551 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Cldn1O88551 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldn1O88551 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cldn1O88551 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Cldn1O88551 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cldn1O88551 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cldn1O88551 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cldn1O88551 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cldn1O88551 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cldn1O88551 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cldn1O88551 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cldn1O88551 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cldn1O88551 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cldn1O88551 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.61■□□□□ 0.09
Cldn1O88551 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cldn1O88551 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cldn1O88551 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Cldn1O88551 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cldn1O88551 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Cldn1O88551 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cldn1O88551 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.61■□□□□ 0.09
Cldn1O88551 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cldn1O88551 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cldn1O88551 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cldn1O88551 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cldn1O88551 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cldn1O88551 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cldn1O88551 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cldn1O88551 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.6■□□□□ 0.09
Cldn1O88551 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.6■□□□□ 0.09
Cldn1O88551 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cldn1O88551 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.6■□□□□ 0.09
Cldn1O88551 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.6■□□□□ 0.09
Cldn1O88551 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.6■□□□□ 0.09
Cldn1O88551 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.6■□□□□ 0.09
Cldn1O88551 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Cldn1O88551 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Cldn1O88551 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Cldn1O88551 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cldn1O88551 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cldn1O88551 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cldn1O88551 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.59■□□□□ 0.09
Cldn1O88551 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cldn1O88551 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cldn1O88551 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cldn1O88551 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cldn1O88551 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cldn1O88551 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cldn1O88551 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cldn1O88551 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cldn1O88551 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cldn1O88551 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cldn1O88551 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cldn1O88551 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cldn1O88551 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cldn1O88551 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cldn1O88551 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cldn1O88551 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.58■□□□□ 0.08
Cldn1O88551 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cldn1O88551 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cldn1O88551 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cldn1O88551 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Cldn1O88551 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cldn1O88551 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Cldn1O88551 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Cldn1O88551 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.58■□□□□ 0.08
Cldn1O88551 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cldn1O88551 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldn1O88551 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldn1O88551 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldn1O88551 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldn1O88551 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldn1O88551 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Cldn1O88551 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.57■□□□□ 0.08
Cldn1O88551 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldn1O88551 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.57■□□□□ 0.08
Cldn1O88551 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cldn1O88551 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms