Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cops4O88544 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.85■□□□□ 0.29
Cops4O88544 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cops4O88544 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cops4O88544 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.85■□□□□ 0.29
Cops4O88544 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops4O88544 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops4O88544 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Cops4O88544 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.85■□□□□ 0.29
Cops4O88544 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops4O88544 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops4O88544 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops4O88544 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops4O88544 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops4O88544 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops4O88544 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cops4O88544 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops4O88544 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cops4O88544 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops4O88544 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cops4O88544 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops4O88544 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops4O88544 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops4O88544 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops4O88544 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cops4O88544 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops4O88544 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.84■□□□□ 0.29
Cops4O88544 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.84■□□□□ 0.29
Cops4O88544 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cops4O88544 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops4O88544 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops4O88544 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cops4O88544 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Cops4O88544 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cops4O88544 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Cops4O88544 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cops4O88544 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cops4O88544 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cops4O88544 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.83■□□□□ 0.28
Cops4O88544 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cops4O88544 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cops4O88544 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cops4O88544 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.83■□□□□ 0.28
Cops4O88544 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cops4O88544 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cops4O88544 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cops4O88544 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.83■□□□□ 0.28
Cops4O88544 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cops4O88544 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cops4O88544 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.82■□□□□ 0.28
Cops4O88544 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops4O88544 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cops4O88544 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops4O88544 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cops4O88544 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
Cops4O88544 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops4O88544 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cops4O88544 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops4O88544 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cops4O88544 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops4O88544 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Cops4O88544 Gm21956-201ENSMUST00000179946 522 ntBASIC16.82■□□□□ 0.28
Cops4O88544 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cops4O88544 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.82■□□□□ 0.28
Cops4O88544 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops4O88544 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops4O88544 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops4O88544 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Cops4O88544 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cops4O88544 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cops4O88544 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops4O88544 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops4O88544 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops4O88544 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.81■□□□□ 0.28
Cops4O88544 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cops4O88544 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Cops4O88544 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops4O88544 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cops4O88544 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops4O88544 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Cops4O88544 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Cops4O88544 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops4O88544 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cops4O88544 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cops4O88544 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops4O88544 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.81■□□□□ 0.28
Cops4O88544 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.81■□□□□ 0.28
Cops4O88544 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops4O88544 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops4O88544 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.81■□□□□ 0.28
Cops4O88544 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops4O88544 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops4O88544 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops4O88544 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Cops4O88544 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.8■□□□□ 0.28
Cops4O88544 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops4O88544 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops4O88544 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops4O88544 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops4O88544 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms