Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnmt3aO88508 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Dnmt3aO88508 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Dnmt3aO88508 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Dnmt3aO88508 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.31■□□□□ 0.52
Dnmt3aO88508 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.31■□□□□ 0.52
Dnmt3aO88508 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Dnmt3aO88508 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Dnmt3aO88508 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnmt3aO88508 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.31■□□□□ 0.52
Dnmt3aO88508 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnmt3aO88508 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnmt3aO88508 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnmt3aO88508 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnmt3aO88508 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.31■□□□□ 0.52
Dnmt3aO88508 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dnmt3aO88508 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dnmt3aO88508 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Dnmt3aO88508 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dnmt3aO88508 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.3■□□□□ 0.52
Dnmt3aO88508 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Dnmt3aO88508 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Dnmt3aO88508 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Dnmt3aO88508 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dnmt3aO88508 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.3■□□□□ 0.52
Dnmt3aO88508 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Dnmt3aO88508 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Dnmt3aO88508 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Dnmt3aO88508 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dnmt3aO88508 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Dnmt3aO88508 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dnmt3aO88508 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dnmt3aO88508 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Dnmt3aO88508 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dnmt3aO88508 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Dnmt3aO88508 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Dnmt3aO88508 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dnmt3aO88508 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.29■□□□□ 0.52
Dnmt3aO88508 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.29■□□□□ 0.52
Dnmt3aO88508 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dnmt3aO88508 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.29■□□□□ 0.52
Dnmt3aO88508 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.29■□□□□ 0.52
Dnmt3aO88508 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dnmt3aO88508 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.29■□□□□ 0.52
Dnmt3aO88508 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Dnmt3aO88508 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dnmt3aO88508 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dnmt3aO88508 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Dnmt3aO88508 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnmt3aO88508 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.28■□□□□ 0.52
Dnmt3aO88508 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.28■□□□□ 0.52
Dnmt3aO88508 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Dnmt3aO88508 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.28■□□□□ 0.52
Dnmt3aO88508 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnmt3aO88508 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.28■□□□□ 0.52
Dnmt3aO88508 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Dnmt3aO88508 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnmt3aO88508 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnmt3aO88508 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnmt3aO88508 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnmt3aO88508 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.28■□□□□ 0.52
Dnmt3aO88508 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Dnmt3aO88508 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnmt3aO88508 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnmt3aO88508 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnmt3aO88508 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnmt3aO88508 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Dnmt3aO88508 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnmt3aO88508 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Dnmt3aO88508 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnmt3aO88508 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnmt3aO88508 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Dnmt3aO88508 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnmt3aO88508 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnmt3aO88508 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Dnmt3aO88508 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Dnmt3aO88508 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnmt3aO88508 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Dnmt3aO88508 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnmt3aO88508 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Dnmt3aO88508 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Dnmt3aO88508 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Dnmt3aO88508 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnmt3aO88508 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.26■□□□□ 0.51
Dnmt3aO88508 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Dnmt3aO88508 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.26■□□□□ 0.51
Dnmt3aO88508 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnmt3aO88508 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.26■□□□□ 0.51
Dnmt3aO88508 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnmt3aO88508 Gm5408-201ENSMUST00000197998 747 ntBASIC18.26■□□□□ 0.51
Dnmt3aO88508 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnmt3aO88508 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnmt3aO88508 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnmt3aO88508 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Dnmt3aO88508 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.26■□□□□ 0.51
Dnmt3aO88508 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnmt3aO88508 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Dnmt3aO88508 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnmt3aO88508 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dnmt3aO88508 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms