Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Capns1O88456 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Capns1O88456 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Capns1O88456 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Capns1O88456 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Capns1O88456 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Capns1O88456 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Capns1O88456 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
Capns1O88456 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Capns1O88456 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Capns1O88456 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.84■□□□□ 0.29
Capns1O88456 Spcs1-204ENSMUST00000226782 949 ntBASIC16.84■□□□□ 0.29
Capns1O88456 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Capns1O88456 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Capns1O88456 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Capns1O88456 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Capns1O88456 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Capns1O88456 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.83■□□□□ 0.28
Capns1O88456 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capns1O88456 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Capns1O88456 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
Capns1O88456 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Capns1O88456 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capns1O88456 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capns1O88456 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.83■□□□□ 0.28
Capns1O88456 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.83■□□□□ 0.28
Capns1O88456 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capns1O88456 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capns1O88456 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capns1O88456 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capns1O88456 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Capns1O88456 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capns1O88456 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capns1O88456 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Capns1O88456 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Capns1O88456 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capns1O88456 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capns1O88456 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capns1O88456 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Capns1O88456 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Capns1O88456 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Capns1O88456 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Capns1O88456 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Capns1O88456 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.82■□□□□ 0.28
Capns1O88456 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Capns1O88456 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Capns1O88456 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.82■□□□□ 0.28
Capns1O88456 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Capns1O88456 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.82■□□□□ 0.28
Capns1O88456 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Capns1O88456 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Capns1O88456 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Capns1O88456 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.81■□□□□ 0.28
Capns1O88456 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Capns1O88456 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Capns1O88456 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Capns1O88456 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Capns1O88456 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.81■□□□□ 0.28
Capns1O88456 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Capns1O88456 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Capns1O88456 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Capns1O88456 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Capns1O88456 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Capns1O88456 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Capns1O88456 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Capns1O88456 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Capns1O88456 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Capns1O88456 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Capns1O88456 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capns1O88456 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capns1O88456 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capns1O88456 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Capns1O88456 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Capns1O88456 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capns1O88456 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capns1O88456 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capns1O88456 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Capns1O88456 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capns1O88456 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Capns1O88456 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.8■□□□□ 0.28
Capns1O88456 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capns1O88456 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Capns1O88456 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capns1O88456 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capns1O88456 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capns1O88456 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capns1O88456 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Capns1O88456 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capns1O88456 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.79■□□□□ 0.28
Capns1O88456 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.79■□□□□ 0.28
Capns1O88456 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capns1O88456 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Capns1O88456 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capns1O88456 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capns1O88456 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capns1O88456 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capns1O88456 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Capns1O88456 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capns1O88456 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.79■□□□□ 0.28
Capns1O88456 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms