Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc3O88196 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ttc3O88196 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.23■□□□□ 0.67
Ttc3O88196 Gm12382-201ENSMUST00000122005 922 ntBASIC19.23■□□□□ 0.67
Ttc3O88196 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.23■□□□□ 0.67
Ttc3O88196 Gm7977-201ENSMUST00000193787 748 ntBASIC19.23■□□□□ 0.67
Ttc3O88196 Gm43799-201ENSMUST00000201845 579 ntBASIC19.23■□□□□ 0.67
Ttc3O88196 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ttc3O88196 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc3O88196 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.23■□□□□ 0.67
Ttc3O88196 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.23■□□□□ 0.67
Ttc3O88196 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc3O88196 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc3O88196 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc3O88196 Mir6349-201ENSMUST00000184059 97 ntBASIC19.23■□□□□ 0.67
Ttc3O88196 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Ttc3O88196 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.23■□□□□ 0.67
Ttc3O88196 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc3O88196 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc3O88196 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc3O88196 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc3O88196 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ttc3O88196 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc3O88196 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc3O88196 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ttc3O88196 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc3O88196 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc3O88196 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc3O88196 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.22■□□□□ 0.67
Ttc3O88196 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Ttc3O88196 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc3O88196 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc3O88196 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.21■□□□□ 0.67
Ttc3O88196 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ttc3O88196 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ttc3O88196 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ttc3O88196 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ttc3O88196 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ttc3O88196 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ttc3O88196 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ttc3O88196 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ttc3O88196 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ttc3O88196 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ttc3O88196 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.21■□□□□ 0.67
Ttc3O88196 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ttc3O88196 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ttc3O88196 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ttc3O88196 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ttc3O88196 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ttc3O88196 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ttc3O88196 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ttc3O88196 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.2■□□□□ 0.66
Ttc3O88196 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ttc3O88196 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ttc3O88196 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ttc3O88196 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ttc3O88196 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.2■□□□□ 0.66
Ttc3O88196 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ttc3O88196 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Ttc3O88196 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ttc3O88196 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Ttc3O88196 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ttc3O88196 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ttc3O88196 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ttc3O88196 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc3O88196 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc3O88196 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.18■□□□□ 0.66
Ttc3O88196 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc3O88196 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc3O88196 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc3O88196 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc3O88196 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.18■□□□□ 0.66
Ttc3O88196 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc3O88196 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc3O88196 Gm5417-201ENSMUST00000079706 384 ntBASIC19.18■□□□□ 0.66
Ttc3O88196 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.18■□□□□ 0.66
Ttc3O88196 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc3O88196 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ttc3O88196 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc3O88196 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc3O88196 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc3O88196 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc3O88196 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc3O88196 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc3O88196 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc3O88196 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.17■□□□□ 0.66
Ttc3O88196 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ttc3O88196 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ttc3O88196 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc3O88196 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc3O88196 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc3O88196 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.17■□□□□ 0.66
Ttc3O88196 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc3O88196 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.17■□□□□ 0.66
Ttc3O88196 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc3O88196 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc3O88196 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc3O88196 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc3O88196 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.16■□□□□ 0.66
Ttc3O88196 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms