Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.99■□□□□ 0.95
Copb2O55029 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Copb2O55029 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.99■□□□□ 0.95
Copb2O55029 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.99■□□□□ 0.95
Copb2O55029 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Copb2O55029 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Copb2O55029 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Copb2O55029 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Copb2O55029 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Copb2O55029 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Copb2O55029 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Copb2O55029 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Copb2O55029 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.98■□□□□ 0.95
Copb2O55029 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Copb2O55029 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Copb2O55029 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Copb2O55029 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Copb2O55029 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Copb2O55029 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Copb2O55029 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Copb2O55029 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Copb2O55029 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.97■□□□□ 0.95
Copb2O55029 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Copb2O55029 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Copb2O55029 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Copb2O55029 Gm15378-201ENSMUST00000121894 207 ntBASIC20.97■□□□□ 0.95
Copb2O55029 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.97■□□□□ 0.95
Copb2O55029 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Copb2O55029 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Copb2O55029 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Copb2O55029 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Copb2O55029 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.97■□□□□ 0.95
Copb2O55029 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Copb2O55029 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Copb2O55029 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Copb2O55029 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Copb2O55029 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Copb2O55029 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.96■□□□□ 0.95
Copb2O55029 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.96■□□□□ 0.95
Copb2O55029 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.96■□□□□ 0.95
Copb2O55029 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.96■□□□□ 0.95
Copb2O55029 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Copb2O55029 Zfp783-201ENSMUST00000095946 670 ntBASIC20.96■□□□□ 0.95
Copb2O55029 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Copb2O55029 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Copb2O55029 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Copb2O55029 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Copb2O55029 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Copb2O55029 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Copb2O55029 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Copb2O55029 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Copb2O55029 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Copb2O55029 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Copb2O55029 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Copb2O55029 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.95■□□□□ 0.94
Copb2O55029 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Copb2O55029 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.95■□□□□ 0.94
Copb2O55029 Gm6576-201ENSMUST00000169678 883 ntBASIC20.95■□□□□ 0.94
Copb2O55029 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.95■□□□□ 0.94
Copb2O55029 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Copb2O55029 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Copb2O55029 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Copb2O55029 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Copb2O55029 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.94■□□□□ 0.94
Copb2O55029 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Copb2O55029 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Copb2O55029 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Copb2O55029 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Copb2O55029 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Copb2O55029 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Copb2O55029 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Copb2O55029 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.94■□□□□ 0.94
Copb2O55029 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Copb2O55029 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Copb2O55029 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Copb2O55029 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Copb2O55029 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Copb2O55029 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Copb2O55029 Mir7071-201ENSMUST00000184847 69 ntBASIC20.93■□□□□ 0.94
Copb2O55029 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.93■□□□□ 0.94
Copb2O55029 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Copb2O55029 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Copb2O55029 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Copb2O55029 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Copb2O55029 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Copb2O55029 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.93■□□□□ 0.94
Copb2O55029 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Copb2O55029 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.93■□□□□ 0.94
Copb2O55029 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Copb2O55029 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Copb2O55029 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Copb2O55029 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.92■□□□□ 0.94
Copb2O55029 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Copb2O55029 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Copb2O55029 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.92■□□□□ 0.94
Copb2O55029 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Copb2O55029 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Copb2O55029 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Copb2O55029 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Copb2O55029 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms